Pairwise Alignments

Query, 371 a.a., permease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 342 a.a., Predicted permeases from Phaeobacter inhibens DSM 17395

 Score =  102 bits (253), Expect = 2e-26
 Identities = 73/256 (28%), Positives = 116/256 (45%), Gaps = 7/256 (2%)

Query: 114 LAACFGAVTPFCSCSSVPLFIGFSTAGIPLGITMAFLITSPLVNEVAVVLLWGLLGWKLT 173
           LAA FG + PFCSC  +P   G    G PL   MAF + SPL++   +++  G LGW   
Sbjct: 91  LAAVFGGLAPFCSCEVIPFIAGLLALGAPLSAVMAFWLASPLIDPPTLLITAGALGWPFA 150

Query: 174 LVYVGIGLLAGVFGGGCMSWVKAERWLQPFIRQAMRPAGGGLTPFAPLPSAVAPKMT-WR 232
           +      +  G+FGG  +  ++        +RQA  P  G     A  P A AP    WR
Sbjct: 151 IAKAVAAVALGLFGGFAIKALRGAGAFASPLRQA--PTSGCCGCGA--PKAEAPVWAFWR 206

Query: 233 D--RHSFAKNETSSIFSRVWKWVIGGVALGAALHGYLPQEWVEETLGKGQWWSVPAAVAV 290
           +  R S  + E  S    + KW+     L A L  Y+P + +   +G      +  A  V
Sbjct: 207 EPARRSQFRQEFISNGLFLVKWLTLAYVLEALLVSYVPADLIATLVGGEGLLPIATAALV 266

Query: 291 GIPLYANVTGIIPVMESLLLKGMPIGTTLALCMSAVGASLPEFIMLKQVMQWRLLALFGG 350
           G+P Y N     P++  L+ +GM  G  +A  ++   +S+P    +  +++ ++ A +  
Sbjct: 267 GMPAYLNSYVAPPLLAGLMDQGMSAGAAMAFMVAGAVSSIPAMAAVWSLVKPQVFATYLA 326

Query: 351 LLLVLFTCAGWLLNMV 366
           L +     +G L  MV
Sbjct: 327 LGITGAILSGILFQMV 342



 Score = 36.6 bits (83), Expect = 1e-06
 Identities = 21/86 (24%), Positives = 36/86 (41%)

Query: 103 LAGKRQALGYPLAACFGAVTPFCSCSSVPLFIGFSTAGIPLGITMAFLITSPLVNEVAVV 162
           L G    L    AA  G      S  + PL  G    G+  G  MAF++   + +  A+ 
Sbjct: 251 LVGGEGLLPIATAALVGMPAYLNSYVAPPLLAGLMDQGMSAGAAMAFMVAGAVSSIPAMA 310

Query: 163 LLWGLLGWKLTLVYVGIGLLAGVFGG 188
            +W L+  ++   Y+ +G+   +  G
Sbjct: 311 AVWSLVKPQVFATYLALGITGAILSG 336