Pairwise Alignments

Query, 371 a.a., permease, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 358 a.a., permease (RefSeq) from Shewanella sp. ANA-3

 Score =  145 bits (365), Expect = 2e-39
 Identities = 98/348 (28%), Positives = 172/348 (49%), Gaps = 47/348 (13%)

Query: 60  TRLGSSIVFFMYDTVKILMLLVMMVYGIAWMRAGLNVERVRTYLAGKRQALGYPLAACFG 119
           T L  ++  F++   ++ +L + + Y +  ++  +  ++V++ L+  R   GY +AA  G
Sbjct: 7   TILKETVNMFVFLAFELTLLFLAISYLVGMLQEFITPQKVQSILSS-RHGRGYIVAALLG 65

Query: 120 AVTPFCSCSSVPLFIGFSTAGIPLGITMAFLITSPLVNEVAVVLLWGLLGWKLTLVYVGI 179
           ++TPFCSCS++P   G   A    G  M FL  SPL+N V + L     G+K+ L Y  +
Sbjct: 66  SITPFCSCSTIPFLKGLLRARAGFGPMMVFLFASPLLNPVIIGLFVVTFGFKVALFYFTV 125

Query: 180 GLLAGVFGG------GCMSWVKAERWLQPFIRQAMR----------PAGGGLTPFAPLPS 223
            L   V  G      G   +V+ E + Q     A             +G  +TP AP+ S
Sbjct: 126 ALGVSVIAGYLLEKLGFEQYVRQEAYAQADTATAASCCDTKPSPTASSGCEVTP-APVVS 184

Query: 224 A-----VAPKMTWR-------------DRHSFAKNETSSIFSRVWK-----------WVI 254
           A      AP +T                  +  +N+  S + +VW+           ++ 
Sbjct: 185 ACCDSKTAPAVTLCCVTQAEPIATSCCPSQTVPQNKPQSRWVKVWRATWKDFKQVLPYLF 244

Query: 255 GGVALGAALHGYLPQEWVEETLGKGQWWSVPAAVAVGIPLYANVTGIIPVMESLLLKGMP 314
            GV LG+ ++G++P E + +  G+  W+++P A  +GIPLY     +IP+  +L+ KGM 
Sbjct: 245 IGVLLGSMIYGFMPTELIVQYAGEATWYAIPIAALIGIPLYIRAEAVIPLSAALIQKGMA 304

Query: 315 IGTTLALCMSAVGASLPEFIMLKQVMQWRLLALFGGLLLVLFTCAGWL 362
           +G+ +AL + + GASL E I+LK + + +++A F  ++L +   AG+L
Sbjct: 305 MGSVMALIIGSAGASLTEVILLKAIFKGQMIAAFLSVILGMAVGAGFL 352



 Score = 30.8 bits (68), Expect = 6e-05
 Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 7/117 (5%)

Query: 78  MLLVMMVYGIAWMRAGLNVERVRTYLAGKRQALGYPLAACFGAVTPFCSCSSVPLFIGFS 137
           +LL  M+YG       +  E +  Y AG+      P+AA  G      + + +PL     
Sbjct: 247 VLLGSMIYGF------MPTELIVQY-AGEATWYAIPIAALIGIPLYIRAEAVIPLSAALI 299

Query: 138 TAGIPLGITMAFLITSPLVNEVAVVLLWGLLGWKLTLVYVGIGLLAGVFGGGCMSWV 194
             G+ +G  MA +I S   +   V+LL  +   ++   ++ + L   V  G   S++
Sbjct: 300 QKGMAMGSVMALIIGSAGASLTEVILLKAIFKGQMIAAFLSVILGMAVGAGFLYSYL 356