Pairwise Alignments

Query, 677 a.a., excinuclease ABC, B subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 673 a.a., excinuclease ABC subunit B from Pantoea sp. MT58

 Score =  760 bits (1963), Expect = 0.0
 Identities = 385/672 (57%), Positives = 497/672 (73%), Gaps = 4/672 (0%)

Query: 6   FRLHTEFEPTGDQPEAIGQIVANLGHGVRDQVLLGVTGSGKTFTVANVIAACNRPALILA 65
           F+L++ F+P+GDQPEAI ++   L  G+  Q LLGVTGSGKTFTVANVIA  NRP ++LA
Sbjct: 5   FKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLA 64

Query: 66  PNKTLAAQLYNEFRALFPDNAVEYFVSYYDYYQPEAYVPASDTYIEKDSSINDNIDKLRH 125
           PNKTLAAQLY E +  FPDNAVE+FVSYYDYYQPEAYVP+SDT+IEKD+S+N++I+++R 
Sbjct: 65  PNKTLAAQLYGEMKEFFPDNAVEFFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124

Query: 126 AATHALLTRRDVVIVASVSCIYGLGSPEYYARLVIPVECGQRFSMDALMTRLVEVQYQRN 185
           +AT ALL RRDV++VASVS IYGLG P+ Y ++++ +  G      +++ RL E+QY RN
Sbjct: 125 SATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTRGMIIDQRSILRRLSELQYTRN 184

Query: 186 DFDFHRGTFRVRGDVLEVIPAYHHERALRIEFFGDDIDAISEIDPLTGEVLGSVGKTVIY 245
           D  F RGTFRVRG+V+++ PA   + ALR+E F ++++ +S  DPLTG++   V +  IY
Sbjct: 185 DQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQIDSVVPRFTIY 244

Query: 246 PASHYVSDRDNLVRAMSDIRDELGERLREYQSANRLVEAQRLEQRTMLDLEMMEELGYCN 305
           P +HYV+ R+ +++AM DI+ EL +R R     N+L+E QR+ QRT  DLEMM ELGYC+
Sbjct: 245 PKTHYVTPRERILQAMEDIKVELADRRRVLLENNKLLEEQRITQRTQFDLEMMSELGYCS 304

Query: 306 GIENYSRHLDGRAAGQPPSCLLDYFPDDFLLFVDESHITVPQVGAMYKGDRSRKSTLVDF 365
           GIENYSR+L  R  G+ P  L DY P D LL VDESH+T+PQ+G MYKGDR+RK TLV++
Sbjct: 305 GIENYSRYLSARGPGEAPPTLFDYLPADGLLVVDESHVTIPQIGGMYKGDRARKETLVEY 364

Query: 366 GFRLPSALDNRPLEFAEFLTRINQTVYVSATPGKWELDRSQGVIAEQIIRPTGLVDPVVE 425
           GFRLPSALDNRP++F EF     QT+YVSATPGK+EL++S   + +Q++RPTGL+DP++E
Sbjct: 365 GFRLPSALDNRPMKFEEFEALAPQTIYVSATPGKYELEKSGDEVVDQVVRPTGLLDPIIE 424

Query: 426 VRPTRGQVDDLLAECRARAARDERVLITTLTKRMAEDLTEHLGNMGLSVRYLHSDIDTME 485
           VRP   QVDDLL+E R R A +ERVL+T LTKRMAEDLTE+L   G  VRYLHSDIDT+E
Sbjct: 425 VRPVGTQVDDLLSEIRQRVAINERVLVTVLTKRMAEDLTEYLTEHGEKVRYLHSDIDTVE 484

Query: 486 RMAIIQALRRGECDVLVGINLLREGLDIPEVSLVSILDADKEGFLRSTGSLIQTFGRAAR 545
           RM II+ LR GE DVLVGINLLREGLD+PEVSLV+ILDADKEGFLRS  SLIQT GRAAR
Sbjct: 485 RMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544

Query: 546 NAAGRVILYADTVTASMRAAMDETARRRERQQAWNEANGIEPRTIRKSLDTPFDAIYSAA 605
           N  G+ ILY D +T SM  A++ET RRRE+QQ  NE NGI P+ + K +    +   +  
Sbjct: 545 NINGKAILYGDKITPSMARAIEETERRREKQQLHNEQNGIVPQGLNKKITDILELGNNIV 604

Query: 606 SEGGKGKGRGRGRQAAPAVENVAEYGTSPEDMAKHIQKLEREMREAAKELEFERAATLRD 665
              GK K    G   A A   +     +P+ + K I +LE +M++ A+ LEFE+AA +RD
Sbjct: 605 KTRGKAKPARPGEAQALADFKL----LTPQALQKKIHELEGQMQQHAQNLEFEQAANVRD 660

Query: 666 RIRLLRERLIEA 677
           ++  LR   I A
Sbjct: 661 QLHELRTLFIAA 672