Pairwise Alignments

Query, 677 a.a., excinuclease ABC, B subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 696 a.a., excinuclease ABC subunit UvrB from Ralstonia sp. UNC404CL21Col

 Score =  761 bits (1964), Expect = 0.0
 Identities = 384/673 (57%), Positives = 492/673 (73%), Gaps = 11/673 (1%)

Query: 6   FRLHTEFEPTGDQPEAIGQIVANLGHGVRDQVLLGVTGSGKTFTVANVIAACNRPALILA 65
           F+L+  + P GDQPEAI Q+V N+  G+  Q LLGVTGSGKTFT+ANVIA   RPA++ A
Sbjct: 24  FQLYQPYPPAGDQPEAIRQLVENIEDGLSYQTLLGVTGSGKTFTMANVIAQVGRPAIVFA 83

Query: 66  PNKTLAAQLYNEFRALFPDNAVEYFVSYYDYYQPEAYVPASDTYIEKDSSINDNIDKLRH 125
           PNKTLAAQLY+EFR  FP NAVEYFVSYYDYYQPEAYVP  D +IEKDSSIN++I+++R 
Sbjct: 84  PNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQMRL 143

Query: 126 AATHALLTRRDVVIVASVSCIYGLGSPEYYARLVIPVECGQRFSMDALMTRLVEVQYQRN 185
           +AT +LL RRDVVIVA+VS IYG+G+P  Y ++++ +  G + S   ++ RL+ +QY RN
Sbjct: 144 SATKSLLERRDVVIVATVSAIYGIGNPSEYHQMILTLRAGDKVSQRDVIARLIAMQYTRN 203

Query: 186 DFDFHRGTFRVRGDVLEVIPAYHHERALRIEFFGDDIDAISEIDPLTGEVLGSVGKTVIY 245
           + DF RGTFRVRGD +++ PA H E A+R+E F D+++++   DPLTG V   + +  +Y
Sbjct: 204 ETDFQRGTFRVRGDTVDIFPAEHAEMAVRLELFDDEVESLQLFDPLTGRVRQKIPRFTVY 263

Query: 246 PASHYVSDRDNLVRAMSDIRDELGERLREYQSANRLVEAQRLEQRTMLDLEMMEELGYCN 305
           P+SHYV+ R+ ++RA+  I+ EL ERL  +   N+LVEAQRLEQRT  DLEM++ELG+C 
Sbjct: 264 PSSHYVTPRETVLRAIETIKAELRERLDFFYKENKLVEAQRLEQRTRFDLEMLQELGFCK 323

Query: 306 GIENYSRHLDGRAAGQPPSCLLDYFPDDFLLFVDESHITVPQVGAMYKGDRSRKSTLVDF 365
           GIENYSRHL G A G+PP  L+DY P D L+F+DESH+ + Q+  MY GDR+RK TL ++
Sbjct: 324 GIENYSRHLSGSAPGEPPPTLVDYLPPDALMFLDESHVLIGQLNGMYNGDRARKETLAEY 383

Query: 366 GFRLPSALDNRPLEFAEFLTRINQTVYVSATPGKWELDRSQGVIAEQIIRPTGLVDPVVE 425
           GFRLPSALDNRPL+FAEF T++ Q  +VSATPG +E   +   + EQ++RPTGLVDP++E
Sbjct: 384 GFRLPSALDNRPLKFAEFETKMRQVTFVSATPGDYEKKTAGTEVVEQVVRPTGLVDPIIE 443

Query: 426 VRPTRGQVDDLLAECRARAARDERVLITTLTKRMAEDLTEHLGNMGLSVRYLHSDIDTME 485
           VRP   QVDDLL+E   R    ERVL+TTLTKRMAE LTE L   G+ VRYLHSDIDT+E
Sbjct: 444 VRPATTQVDDLLSEIHVRVEAGERVLVTTLTKRMAEQLTEFLSENGIKVRYLHSDIDTVE 503

Query: 486 RMAIIQALRRGECDVLVGINLLREGLDIPEVSLVSILDADKEGFLRSTGSLIQTFGRAAR 545
           R+ II+ LR G  DVLVGINLLREGLDIPEVSLV+ILDADKEGFLR+  SLIQT GRAAR
Sbjct: 504 RVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 563

Query: 546 NAAGRVILYADTVTASMRAAMDETARRRERQQAWNEANGIEPRTIRKSLDTPFDAIYSAA 605
           N  G  ILYAD +T SM+ A+DET RRR +Q A NEA+GI PR + K +    D +Y+  
Sbjct: 564 NVNGTAILYADRMTDSMKKAIDETERRRAKQIAHNEAHGITPRGVVKRIKDIIDGVYNVD 623

Query: 606 SEGGKGKGRGRGRQAAPAVENVAEYGTSPEDMA-KHIQKLEREMREAAKELEFERAATLR 664
                       R    A +  A+Y    E  A K I++LE++M + AK LEFE+AA +R
Sbjct: 624 D----------ARAELKAAQEAAKYEDMSEKQASKEIKRLEKQMLDHAKNLEFEKAAAVR 673

Query: 665 DRIRLLRERLIEA 677
           D++  L+ +L  A
Sbjct: 674 DQLAKLKSQLFGA 686