Pairwise Alignments

Query, 677 a.a., excinuclease ABC, B subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 697 a.a., excinuclease ABC subunit B from Burkholderia phytofirmans PsJN

 Score =  751 bits (1940), Expect = 0.0
 Identities = 378/672 (56%), Positives = 490/672 (72%), Gaps = 10/672 (1%)

Query: 6   FRLHTEFEPTGDQPEAIGQIVANLGHGVRDQVLLGVTGSGKTFTVANVIAACNRPALILA 65
           F+L+  + P GDQP AI  +V  +  G+  Q LLGVTGSGKTFT+AN IA   RPA++ A
Sbjct: 26  FQLYQPYPPAGDQPTAIDTLVEGVEDGLSFQTLLGVTGSGKTFTMANTIARLGRPAIVFA 85

Query: 66  PNKTLAAQLYNEFRALFPDNAVEYFVSYYDYYQPEAYVPASDTYIEKDSSINDNIDKLRH 125
           PNKTLAAQLY+EFR  FP NAVEYFVSYYDYYQPEAYVP  D +IEKDSSIN++I+++R 
Sbjct: 86  PNKTLAAQLYSEFREFFPRNAVEYFVSYYDYYQPEAYVPQRDLFIEKDSSINEHIEQMRL 145

Query: 126 AATHALLTRRDVVIVASVSCIYGLGSPEYYARLVIPVECGQRFSMDALMTRLVEVQYQRN 185
           +AT +L+ RRDVVIVA+VS IYG+G+P  Y ++++ +  G +     ++ RL+ +QY RN
Sbjct: 146 SATKSLMERRDVVIVATVSAIYGIGNPSEYHKMILTLRTGDKLGQRDIIARLIAMQYNRN 205

Query: 186 DFDFHRGTFRVRGDVLEVIPAYHHERALRIEFFGDDIDAISEIDPLTGEVLGSVGKTVIY 245
           + DF RG+FRVRGD +++ PA H E A+R+E F D+I+ +   DPLTG V   + +  +Y
Sbjct: 206 EADFQRGSFRVRGDTIDIFPAEHAEMAVRVELFDDEIETLQLFDPLTGRVRQKIPRFTVY 265

Query: 246 PASHYVSDRDNLVRAMSDIRDELGERLREYQSANRLVEAQRLEQRTMLDLEMMEELGYCN 305
           P+SHYV+ RD +VRA+  I+ EL ERL  + S  +LVEAQRLEQRT  DLEM++ELG+C 
Sbjct: 266 PSSHYVTPRDTVVRAVETIKAELRERLEFFYSGGKLVEAQRLEQRTRFDLEMLQELGFCK 325

Query: 306 GIENYSRHLDGRAAGQPPSCLLDYFPDDFLLFVDESHITVPQVGAMYKGDRSRKSTLVDF 365
           GIENYSRH  G A G+PP  L+DY P D L+ +DESH+ + Q+  MY GDR+RK  LVD+
Sbjct: 326 GIENYSRHFSGAAPGEPPPTLVDYLPSDALMLLDESHVLIGQLNGMYNGDRARKENLVDY 385

Query: 366 GFRLPSALDNRPLEFAEFLTRINQTVYVSATPGKWELDRSQGVIAEQIIRPTGLVDPVVE 425
           GFRLPSALDNRPL+F EF  ++ Q V+VSATP  +E  ++ G +AEQ++RPTGLVDP +E
Sbjct: 386 GFRLPSALDNRPLKFNEFERKMRQVVFVSATPADYE-QKTAGQVAEQLVRPTGLVDPEIE 444

Query: 426 VRPTRGQVDDLLAECRARAARDERVLITTLTKRMAEDLTEHLGNMGLSVRYLHSDIDTME 485
           VRP R QVDD+L E   R    +RVL+T LTKRMAE LTE L + G+ VRYLHSDIDT+E
Sbjct: 445 VRPARSQVDDVLGEINERVKAGDRVLVTVLTKRMAEQLTEFLADHGVKVRYLHSDIDTVE 504

Query: 486 RMAIIQALRRGECDVLVGINLLREGLDIPEVSLVSILDADKEGFLRSTGSLIQTFGRAAR 545
           R+ II+ LR G  DVLVGINLLREGLDIPEVSLV+ILDADKEGFLR+  SLIQT GRAAR
Sbjct: 505 RVEIIRDLRLGTFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRAERSLIQTIGRAAR 564

Query: 546 NAAGRVILYADTVTASMRAAMDETARRRERQQAWNEANGIEPRTIRKSLDTPFDAIYSAA 605
           N  G+ ILY D +T SMR A+DET RRR +Q A+N ANGI PR + K +    D +Y+  
Sbjct: 565 NVNGKAILYGDKITDSMRRAIDETERRRNKQIAFNLANGITPRGVVKRIRDIIDGVYNV- 623

Query: 606 SEGGKGKGRGRGRQAAPAVENVAEYGTSPEDMAKHIQKLEREMREAAKELEFERAATLRD 665
                 +   + +QA    E+++E     + +AK +++LE++M E AK LEFE+AA  RD
Sbjct: 624 ---DDARAELKEQQARAKFEDMSE-----KQLAKELKRLEKQMMEHAKNLEFEKAAQTRD 675

Query: 666 RIRLLRERLIEA 677
           ++ LLR+R+  A
Sbjct: 676 QLALLRQRVFGA 687