Pairwise Alignments

Query, 580 a.a., arginine N-succinyltransferase, beta subunit, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 411 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score = 58.9 bits (141), Expect = 4e-13
 Identities = 40/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)

Query: 103 VQNLGVSVREYARIVRTLQMLGIATRIESARLGADGRGFSTLADDVEKLAGKIIEYSSSL 162
           V  L       ++I     +L +   IE+AR G  GRGF+ +AD+V  LA +  E +S +
Sbjct: 188 VMGLNEITEVISKIANETNLLALNAAIEAARSGEMGRGFAVVADEVRHLAQRAGEAASQI 247

Query: 163 LEQGRALDVTIAEAEGRSLEMGAKQDSCSLAVSVGLLDGLDNLKRTMASSR-ASSLQVEG 221
            E+  +L   + +      E+  K+ S     +  +++ + +L+++ +S R  S  Q+  
Sbjct: 248 SEEIESLRAEVTQ----RFEVANKESSEQNIKADMMIESVQSLRQSFSSVRELSERQITQ 303

Query: 222 LLA---DINKSMQGLVGSLQFHDIVRQQVEHV 250
           ++    D+ K++ G +   QF DIVRQ+++ +
Sbjct: 304 IMLYNNDLEKNISGSMACTQFQDIVRQKLDSI 335



 Score = 30.4 bits (67), Expect = 1e-04
 Identities = 39/194 (20%), Positives = 80/194 (41%), Gaps = 18/194 (9%)

Query: 242 IVRQQVEHV----VEAVDDVLAGLAR--NAAAESTSGAEELAFAAEVCTLQESQTRAASE 295
           +V   +E+V     +A +D+L  +    +AAA  T   +++ F ++       +      
Sbjct: 102 LVADHIENVNSDAQKATEDILNHICSLDHAAANFTHYLKDMEFDSQNMVSSLDEHTLVIS 161

Query: 296 SLSTAVASLRSEMRTIASSVRQVVLDAGGGSGEGASESTAAKVLDALENEVRAAATSMRE 355
           +L+ +  SL S ++T    V  V+         G +E T  +V+  + NE    A +   
Sbjct: 162 NLADSTRSLMSNIQTERKQVNDVL-----NRVMGLNEIT--EVISKIANETNLLALNAAI 214

Query: 356 LAVQGEDMGRTMEMVASTVSDMTAFLAD-IEDVGSEIELIALNAS----ISAAHTGDKGK 410
            A +  +MGR   +VA  V  +     +    +  EIE +    +    ++   + ++  
Sbjct: 215 EAARSGEMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRFEVANKESSEQNI 274

Query: 411 ALGVLATSIQRLSQ 424
              ++  S+Q L Q
Sbjct: 275 KADMMIESVQSLRQ 288



 Score = 25.0 bits (53), Expect = 0.006
 Identities = 17/72 (23%), Positives = 32/72 (44%), Gaps = 5/72 (6%)

Query: 1   MSAVVEIARDVSTHLVEIGKGLARVVHEQEQTFLDLGDAVQRIAMQVGGIGDEARDLVRV 60
           ++A +E AR       E+G+G A V  E        G+A  +I+ ++  +  E      V
Sbjct: 210 LNAAIEAARSG-----EMGRGFAVVADEVRHLAQRAGEAASQISEEIESLRAEVTQRFEV 264

Query: 61  TSGEAMSHILEA 72
            + E+    ++A
Sbjct: 265 ANKESSEQNIKA 276