Pairwise Alignments

Query, 404 a.a., outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 420 a.a., Long-chain fatty acid transport protein from Pseudomonas stutzeri RCH2

 Score =  158 bits (399), Expect = 3e-43
 Identities = 109/418 (26%), Positives = 190/418 (45%), Gaps = 20/418 (4%)

Query: 3   KVLLVLCLALCPLQAWAAGYGVYEWSARGNALGGAMVARDADPSSVAY-NPAAITDLEGA 61
           K  L + +     QA AAG+ + E S  G     A  +  AD ++  + NPA ++ L+  
Sbjct: 7   KTALAVAVGALSTQAMAAGFALNEQSISGMGTSFAGRSSSADDATTLFGNPAGMSRLKRE 66

Query: 62  QIQMGATAI---------APTAKMTSNTPGKRDAEFSDSIWGLPTFYYTQQLSDNYWFGF 112
           ++  G  AI         + T  + +   G  D +       +P  YY + + D +  G 
Sbjct: 67  EVSFGLAAIHAKTEIKNTSATTALGTPVGGSNDGDMVP-FTAVPMGYYVKPIDDKWAVGV 125

Query: 113 GMFSRVGLGTDYKDTDTWPGRYNCSYAAIHSVSLNPNLAMKLTDELSVAFG--LDATYLR 170
           G++   G+ TDY+    + GRY+  Y+ +  +++ P ++ +  ++LSV FG  L+     
Sbjct: 126 GLYVPFGMITDYESG--YQGRYHGDYSEVRVITVQPTISYRFNEKLSVGFGPTLNRVDGE 183

Query: 171 FMYDTTISPVDVMQQIDADGWAYGLNLGARYKPYDWLAFGVAWRSEMQLTVNGNVDFTQK 230
               T +   D   ++  D  A G N G  Y+       G+ +RS+++ T+ G+    + 
Sbjct: 184 LQSATFLGAADGRVKVKGDDTAVGFNAGILYEFTPHTRMGLTYRSKVEYTLEGDTKLKEG 243

Query: 231 -GAVPAPAARDVRGTEPIPESITFGVMVKPFDKLSLEVDAVWTRWSAYNTLVINYDPALY 289
               P     D       PESI   V  +  D+ +L   A+ TRWS +  +VI  D    
Sbjct: 244 FSQTPLGGKYDASLDLTTPESIDISVTHELNDQWTLYAGAMLTRWSRFEAIVIENDGLPS 303

Query: 290 GK-SSVSAEKNWKNTWRLQFGAEYALTDSIDLRAGYVYDQTPVDDAHEDYAVPCSDRQIA 348
           G  + +  ++ W +TW    G  Y L     LR G  +DQ+P ++      +P  DR   
Sbjct: 304 GPLNPIVEDQEWHDTWSYAIGTSYKLNREWTLRTGLAFDQSPTNNVDRSPRIPSGDRTAV 363

Query: 349 TTGIGWKINEAWVLDASYSYLWMTDREY--EARSGGIYDSTREDAHAHMAGLSLTYKF 404
           + G+GW   +   +D +YSYLW  D +   ++ + G Y +  E++ AH  G +L+Y+F
Sbjct: 364 SFGLGWNPTDDITVDLAYSYLWEEDTKVRRDSPTRGTYYADYENS-AHGFGAALSYRF 420