Pairwise Alignments

Query, 404 a.a., outer membrane transport protein, OmpP1/FadL/TodX family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 452 a.a., membrane protein involved in aromatic hydrocarbon degradation (RefSeq) from Shewanella amazonensis SB2B

 Score =  120 bits (300), Expect = 1e-31
 Identities = 108/437 (24%), Positives = 192/437 (43%), Gaps = 56/437 (12%)

Query: 16  QAWAAGYGVYEWSARGNALGGAMVARDADPSSV-AYNPAAITDLEGAQIQMGATAIAPTA 74
           Q  AAG+ + E+SA G     A  A  AD ++  A NPA +  L G Q+  G   +A   
Sbjct: 22  QVNAAGFQLAEYSATGLGRAFAGEAAMADNAAAQARNPAMLAYLSGRQVSGGGIYVATEV 81

Query: 75  KMTSN-------------TPGKRDAEFSDSIWGLPTFYYTQQLSDNYWFGFGMFSRVGLG 121
            +T +             T      + +DS   +P FYY+ Q++DN+ +G  + S  GL 
Sbjct: 82  DVTGDVHIASPVLGPQGVTLNADAYDVADSAL-IPNFYYSSQINDNWTWGLAVNSNYGLA 140

Query: 122 TDYKDTDTWPGRYNCSYAAIHSVSLNPNLAMKLTDELSVAFGLDATYLRFMYDTTI---- 177
           T+   T          +  I +V  NPN+A +L D +++  G+   Y             
Sbjct: 141 TELPATHA--ASLFGHHTEITTVEFNPNIAYRLNDAVTLGAGVRIVYGDGSIGAATPYWV 198

Query: 178 ------------------SPVDVMQQIDADGWAYGLNLGARYKPYDWLAFGVAWRSEMQL 219
                              P  V++ ++ D  +YG  +G  ++P +   FG+A+ S ++L
Sbjct: 199 GAIKANPNLPAQIAARLPEPGTVLKTMEGDDVSYGWQVGGSWQPSENHRFGLAYHSGVEL 258

Query: 220 TVNGNVDFTQKGAVPAPAAR-DVRGTEPI--PESITFGVMVKPFDKLSLEVDAVWTRWSA 276
            ++G+      G V       D+ G  P+  P         +  D ++L     WT+WS 
Sbjct: 259 ELSGSA----AGLVYTGGQNLDIEGYLPLELPAFAELSSFHQLSDDVALHASVNWTQWSV 314

Query: 277 YNTLVINYD----PALYGKSSVSAEKNWKNTWRLQFGAEYALTDSIDLRAGYVYDQTPVD 332
           ++ LV  +     P    +S +  E+N+K++WR+  G+ + +     +R+G+  D+T VD
Sbjct: 315 FDRLVAYFPGETKPVGGIESDLVKEENFKDSWRVAVGSTWNVNKDWTVRSGFAVDRTAVD 374

Query: 333 DAHEDYAVPCSDRQIATTGIGWKINEAWVLDASYSYL----WMTDREYEARSGGIYDSTR 388
           D      +P SDR   + G G++ +E   +D + +Y+    +    E++  +G    S  
Sbjct: 375 DEFRTTTIPDSDRLWFSLGAGYRASENLTVDMAITYIRAHGFAPIDEHQDLAGLAQVSFN 434

Query: 389 EDA--HAHMAGLSLTYK 403
            +A     +AG+ L+YK
Sbjct: 435 GEAGGSVWLAGVQLSYK 451