Pairwise Alignments

Query, 807 a.a., mechanosensitive ion channel family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1060 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  127 bits (320), Expect = 2e-33
 Identities = 91/304 (29%), Positives = 144/304 (47%), Gaps = 15/304 (4%)

Query: 494  LVAGALVLWVIAYPGGSYILRHAIEFNFKVG------EVSFDGLRILFILTAFYVTRSLV 547
            LV   L L  +    G +   H+  F+F  G        + DG+     +T   +   L+
Sbjct: 744  LVRSLLTLAFLISLIGLWTQTHSAIFSFLDGITLWTSSSTVDGIAQQLPITLKSLLLGLI 803

Query: 548  AVGSTFLV--RLPQRMHRFDRSMVQPMQ------TAFTYLLWALFGLYV-LNALGVSLTN 598
             VG + ++   LP  +       +   Q      T  +  L   FG+    + LG+  + 
Sbjct: 804  IVGFSLMIATNLPGLLELMILQRLDLTQGTGFAITTVSRYLVVFFGMLSGFSTLGMEWSK 863

Query: 599  LAVIAGGLSVGIGFGLQTIVNNFISGLILIFGRTLQEGDIIDLGGTMGTVRKVSIRATTV 658
            L  +   LSVG+GFGLQ I  NFISGLI++F + ++ GD + +    GTV K+ IRATT+
Sbjct: 864  LQWLVAALSVGLGFGLQEIFANFISGLIILFEKPVRIGDTVTIRELTGTVSKIQIRATTI 923

Query: 659  ETFDNAVIFVPNADLVSNRLTNWTRNSLTIRRDVAVGVAYGSDVELVTRLLLEVAKAHKR 718
              +D   I VPN   ++ +L NW+ +    R  V V VA  SD   V   L +  K    
Sbjct: 924  VDWDRKEIIVPNKAFITEQLINWSLSDPITRVIVYVSVARDSDPARVEAALYQAVKECDD 983

Query: 719  VLHHPGPVVLFDNFGPSSLDFILRVWVDDIAVGVSTASDLRVEIDRVFRENNVEISFPQL 778
             L  P P V F  FG  + D+ +R +  D+         L  ++ +  REN++E+++PQL
Sbjct: 984  ALTTPEPEVWFAGFGQHTQDYEIRAYAKDMNTRWPLRHKLHKQVSKKLRENHLELAYPQL 1043

Query: 779  DLHV 782
            ++H+
Sbjct: 1044 EVHI 1047