Pairwise Alignments

Query, 807 a.a., mechanosensitive ion channel family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 540 a.a., MscS mechanosensitive ion channel (RefSeq) from Shewanella loihica PV-4

 Score =  113 bits (283), Expect = 2e-29
 Identities = 79/268 (29%), Positives = 135/268 (50%), Gaps = 25/268 (9%)

Query: 529 DGLRILFILTAFYVTRSLVAVGSTFLVRLPQRMHRFDR-SMVQPMQTAFTYL----LWAL 583
           +G  +LF L  F +   L  +    + R+ ++M    +    + +Q  F  L    ++AL
Sbjct: 279 NGPGLLFKLFVFLLILFLAHLAGKAVQRIVKKMVSNSKLKFSKLLQDFFVSLSGKTVFAL 338

Query: 584 FGLYVLNALGVSLTNLAVIAGGLSVGIGFGLQTIVNNFISGLILIFGRTLQEGDIIDLGG 643
             +  L+ LG  L  L    G   V IGF LQ  ++NF SG++++  R    GD+I+  G
Sbjct: 339 GLMIALSQLGFELGPLLAGFGVAGVIIGFALQDTLSNFASGMMILIYRPYDVGDLINAAG 398

Query: 644 TMGTVRKVSIRATTVETFDNAVIFVPNADLVSNRLTNWTRNSLTI----RRDVAVGVAYG 699
             G V ++S+ +TT++T DN  + +PN     N++   T N++T+    R D+  G+ YG
Sbjct: 399 VTGKVSQMSLVSTTIKTLDNQRLIIPN-----NKIWGDTINNITVEHQRRVDMTFGIGYG 453

Query: 700 SDVELVTRLLLEVAKAHKRVLHHPGPVVLFDNFGPSSLDFILRVWVD-----DIAVGVST 754
            ++E   ++L  +   H +VL  P P V     G SS+DF++R WV      D+   ++ 
Sbjct: 454 DNIEKAEQVLRGIVDEHPKVLKQPEPTVKLHLLGESSVDFVVRPWVKPEDYWDVYWDITR 513

Query: 755 ASDLRVEIDRVFRENNVEISFPQLDLHV 782
           A  +R      F + ++ I FPQ D+H+
Sbjct: 514 AVKMR------FDQEDISIPFPQRDVHI 535