Pairwise Alignments

Query, 265 a.a., basal-body rod modification protein FlgD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 230 a.a., putative flagellar hook capping protein from Phaeobacter inhibens DSM 17395

 Score = 56.2 bits (134), Expect = 6e-13
 Identities = 49/218 (22%), Positives = 95/218 (43%), Gaps = 6/218 (2%)

Query: 11  QAENEFQSAVKKSGNADLGKDAFLQLLVTQLKHQDPLNPMDDKEFVAQLAQFTSLEQLMG 70
           QA +   +  KK+       + FL++L  Q ++QDPL P+D  E+ AQLAQF+ +EQ + 
Sbjct: 15  QAASTASAEPKKTTGIASDFETFLKMLTAQARYQDPLEPIDSTEYSAQLAQFSMVEQQVQ 74

Query: 71  INTGVTSMNEAFKQQQMMNAVSYIGKDVLASGDQISKIKDGVSKLYFSIDEPITQGVINI 130
            N  +  +        M     ++G +  ++        DG + +  S +       +++
Sbjct: 75  GNEVLEGIQAQLGLANMAAMSGWVGMETRSAAPAYF---DGTNPVTVSPNPAQIADTVHL 131

Query: 131 FNASNELVRSEFISAKQAGDYEYVWDGKDYQGNAMADGLYKVAMAAENDKGKAVLVSTEV 190
               +     + IS   + +  Y W G D  G A   G Y   + ++ + G+ VL  T  
Sbjct: 132 VVKDDTGKEVQRISLPVSAE-PYQWQGIDDDGYAFDPGSYSFTLESQKN-GEVVLSDTAE 189

Query: 191 SGHVIGVETINGTQY-LRMQDGRSVQFMNVSVVVAPST 227
           +   +    + G +  L ++ G ++   +V+ +  P T
Sbjct: 190 TYTRVKETQMRGNEVALILEGGSAILASSVTALREPVT 227