Pairwise Alignments

Query, 253 a.a., ribonuclease III (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 225 a.a., ribonuclease III (RefSeq) from Shewanella loihica PV-4

 Score =  143 bits (361), Expect = 3e-39
 Identities = 88/231 (38%), Positives = 134/231 (58%), Gaps = 12/231 (5%)

Query: 26  VKPVDELQKTIGHRFGDMELLLTAMTHSSWANEQAVPVEHNERLEFLGDAVLELCVSEEL 85
           +K +  L + +G++F  + LL  A+TH S A++      HNERLEFLGD++L + +S+ L
Sbjct: 4   IKNLPRLGRILGYQFQQIALLEQALTHRSAASK------HNERLEFLGDSILSIVISDAL 57

Query: 86  FRRFPSAREGDLTRMRSRLVSKPSLEGVARELRLDMSLRLGKGEESQGGRERGSLLSDAL 145
           + +FP A EGDL+RMR+ LV    L  +A+E +L   L+LG GE   GG  R S+L+DA+
Sbjct: 58  YHQFPKATEGDLSRMRATLVCGKMLAEIAKEFKLGDYLKLGPGELKSGGFRRESILADAM 117

Query: 146 EAMLGAVFLDAGYIAAKGVVMRILGPHFPEALVPVRTKDYKSQLQELTQKLFRDRPVYTL 205
           EA++GA++LDA     + +V+          + PV  KD K+ LQE  Q   +  PVYT+
Sbjct: 118 EAIIGAIYLDADIETCRTLVLNWYKSRL-AVIEPVNQKDPKTLLQEHLQGFKQPLPVYTV 176

Query: 206 LGSSGPEHDKQFDVRV---VLPDGTVFEATGPSMKRAEQMAAARAVATLDK 253
           +  SG  H + F V      L +  +  A   S ++AEQ+AAA  +  + K
Sbjct: 177 VNISGEAHAQTFTVECKVEQLKEAVIGVAN--SRRKAEQIAAAEVLERIKK 225