Pairwise Alignments

Query, 864 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 897 a.a., Beta tubulin, autoregulation binding site (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 1286 bits (3328), Expect = 0.0
 Identities = 640/893 (71%), Positives = 726/893 (81%), Gaps = 32/893 (3%)

Query: 1   MRELLSLLPKPSRYTGIEEGSVHKRREDVAIHCALAFPDMYEVGMSYLGQKILYGILNDR 60
           MRELL LLPKPSRY GIEEG+VHK  +   +  ALAFPDMYEVGMSYLGQKILY ILN+R
Sbjct: 1   MRELLPLLPKPSRYIGIEEGTVHKTPDASTLRVALAFPDMYEVGMSYLGQKILYAILNER 60

Query: 61  EDIWAERVFTPCREAGAILRSHNAPLSTLESDTPLAALHLVGFSITHELCYTNILYMLDL 120
            D+WAERVFTPCR+AGA+LR   APL+TLESDTPLAA HLVGFSITHELCY+N+LYMLDL
Sbjct: 61  PDVWAERVFTPCRDAGAVLRERGAPLATLESDTPLAATHLVGFSITHELCYSNVLYMLDL 120

Query: 121 AGIPLRSADRG--DDLAAWPIIMAGGGCTLAAEPMAPFLDLMVLGEGEEVQVEIIDLLAK 178
           AGIPLR+A+R   D L  WP++MAGGGCTLAAEP+APF+DLMVLGEGEEV  E++DLL  
Sbjct: 121 AGIPLRAAERATADSLTVWPVVMAGGGCTLAAEPLAPFMDLMVLGEGEEVMAELVDLLTA 180

Query: 179 ARSEGWSRTRYLEAASSIPGVYVPAFF--------ADDAQGATPAPLR------------ 218
           AR+ G SR+R+L+ A  IPGVYVP FF        A +  G  P PL             
Sbjct: 181 ARAAGHSRSRFLDDARRIPGVYVPEFFEGSVPPDTARNVPGTPPRPLLLPSSTPSSAPSS 240

Query: 219 -------QGYDKVVRRIIADMDNARYPAAQLVPFGAVHNRLALEIGRGCTRGCRFCQAGM 271
                   GY +V RR++ADMD ARYPA+Q VPFGAVHNRLALEIGRGCTRGCRFCQAG+
Sbjct: 241 APASVNDTGYTRVARRVVADMDTARYPASQTVPFGAVHNRLALEIGRGCTRGCRFCQAGI 300

Query: 272 TYRPARERSVPNLQALLEDCLARTGYDDVSFLSLSTGDFSALKTLFMQTVDRCAEEQVSV 331
            YRPARERS  NL ALLE+CL++TGYDDVSFLSLSTGDFSALK +F+ TVDRCA+EQV+V
Sbjct: 301 IYRPARERSTENLHALLEECLSQTGYDDVSFLSLSTGDFSALKQMFLSTVDRCAQEQVAV 360

Query: 332 SLPSLRVGSIDDDIMRRMAGIRRTGATLAPEAGSQRLRDVINKGVTEEGLMLHVRKLFEH 391
           SLPSLRVGSIDD+IMRRMAGIRRTGATLAPEAGSQRLRDVINKGVTEEGLMLHV+KLFEH
Sbjct: 361 SLPSLRVGSIDDEIMRRMAGIRRTGATLAPEAGSQRLRDVINKGVTEEGLMLHVQKLFEH 420

Query: 392 GWQQVKLYFMLGLPTETYEDLDAIVDLCRKVRDAAGRGVRRLQVTAAVSPFVPKPHTPFQ 451
           GWQQVKLYFM+GLPTET EDLDAIVDLCRKVRDAAG G+RRLQVTAA+SPFVPKPHTPFQ
Sbjct: 421 GWQQVKLYFMIGLPTETREDLDAIVDLCRKVRDAAGPGIRRLQVTAAISPFVPKPHTPFQ 480

Query: 452 WEAQISLEEIRARVGYLRDAFRREKGLKLRWHEPEMSFLEGIFSRGDRRLAPVVESAFRK 511
           WE Q+SLEEIR R+GYL   F+ EK LK+RWHE  MS LEGIFSRGDRRLA VVESA+RK
Sbjct: 481 WERQLSLEEIRERIGYLLSRFKGEKCLKMRWHEASMSALEGIFSRGDRRLANVVESAYRK 540

Query: 512 GAIFSSWMEGFDLAPWLEAMNEHGLSPDEYTCARDIDAPLAWAHLDSGVSREFLLRERER 571
           GAIFSSW+EGFDLAPWL+AM EHGL+  +YT  R  D PL W HLDSG SREFLLRER R
Sbjct: 541 GAIFSSWIEGFDLAPWLDAMAEHGLAASDYTRERSEDEPLPWDHLDSGASREFLLRERHR 600

Query: 572 ALSLKTTPDCRYSGCRVCGVCDTKAGPSRLDRLPGVEAYANRLNFEQRDQQSHEPTLDDN 631
           AL +K T DCRY  C +CGVCDTK+ PSRLD+LPGV AYANR N  QRDQQ+H+PTLD++
Sbjct: 601 ALEMKLTGDCRYGACHLCGVCDTKSSPSRLDKLPGVTAYANRTNLPQRDQQAHQPTLDEH 660

Query: 632 GQVVRHEAPNRPPKLSGDLVHKASQYRIWYTKEDMAVFLSQLELQTIFERALRRAGLPPA 691
           G+V   E  ++PP++S +L  KA  YRIWYTKEDMAVFLSQLELQ++FERALRRAGLPPA
Sbjct: 661 GRVRMPEKTDKPPQISDELALKAGHYRIWYTKEDMAVFLSQLELQSLFERALRRAGLPPA 720

Query: 692 FSQGFHPLPLLSFGRALPVGVASRAEWFTIILRERFTADEVRQRLEGRLPKGMRVTFVEE 751
           FS+GFHPLPLLSFGRALPVGVASRAEW  + LRE  TADEVR+ L+G LP+GMRVTFVEE
Sbjct: 721 FSRGFHPLPLLSFGRALPVGVASRAEWLAVYLREYRTADEVRRALDGGLPRGMRVTFVEE 780

Query: 752 QLPSKRH--PQPVVEVFTLRYLAPEEMQPTFIDAWRTFAACEAFEWTRDTKKGQRTGDIR 809
            LP  R+  PQP  E F LRY   +  +   + AWR FAA  A EWTR+TKKG RT DIR
Sbjct: 781 -LPVGRNTAPQPAGETFELRYGVDDARRDALLQAWRDFAAAPALEWTRETKKGPRTTDIR 839

Query: 810 PLFRDITFEDDGSLTLRLDWTDFYMSPLALARAVFPEAAINELAMTKLEQHFE 862
           PLFR I   DDG + L +DWT+ Y+SPL+LARAV P+A I+E+ + K+ Q F+
Sbjct: 840 PLFRSIEVRDDGCVLLDMDWTELYVSPLSLARAVTPQAEIHEVHLLKMSQRFD 892