Pairwise Alignments

Query, 137 a.a., response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 12/134 (8%)

Query: 4   LVVDDDFDSRRLVQKLLHPYGYVDVATDGEEGVEAFRAALGDGEPYDVITLDILMPNADG 63
           LVVDD  ++  ++ +LL+P+  V +A  G+    A + A     P D+I LDI+MP  DG
Sbjct: 20  LVVDDTKENLTVIGELLNPHYNVRIANSGQR---ALKVANSTPVP-DLILLDIMMPEMDG 75

Query: 64  QQALREIREIEKEHGIAPEKAAKIIMLTGLDDSSEVHDAFFLGEATSYIVKPIRRQILLD 123
            + L E+R       I       +I +T LD   +      LG A  YI KPIR  ILL 
Sbjct: 76  YETLAELRANPATRHI------PVIFVTALDADEDEERGLALG-AVDYIAKPIRPAILLG 128

Query: 124 EIE-KLGVHLSKNE 136
            I  +L + L++++
Sbjct: 129 RIRTQLDLKLAQDQ 142



 Score = 38.9 bits (89), Expect = 2e-07
 Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 14/123 (11%)

Query: 4   LVVDDDFDSRRLVQKLLHPYGYVDV-ATDGEEGVEAFRAALGDGEPYDVITLDILMPNAD 62
           L+VDD+      +++L    GYV + A  G+EG++        G    VI  D  MP  D
Sbjct: 748 LLVDDEPGILSALKRLFRREGYVILTANSGKEGLDILA-----GHDVGVIISDARMPEMD 802

Query: 63  GQQALREIREIEKEHGIAPEKAAKIIMLTGLDDSSEVHDAFFLGEATSYIVKPIRRQILL 122
           G + L ++R +  +           I+L+G  D   V  A   GE   ++ KP     LL
Sbjct: 803 GAEFLGKVRAMYPD--------TMRIILSGYTDLKAVTSAVNRGELFKFLTKPWDDGELL 854

Query: 123 DEI 125
           + I
Sbjct: 855 ETI 857