Pairwise Alignments

Query, 443 a.a., glycine cleavage system P protein, subunit 1 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 962 a.a., glycine dehydrogenase (RefSeq) from Shewanella amazonensis SB2B

 Score =  179 bits (455), Expect = 3e-49
 Identities = 113/344 (32%), Positives = 172/344 (50%), Gaps = 16/344 (4%)

Query: 9   EDVSVMLDAIGVNTIEDLFADIPAEMRPKSFALPKGLSEMDVCSRLEALSARNRTDVV-S 67
           ++   ML+ +G  ++EDL A I  E       L  G S  +           ++  V  S
Sbjct: 25  DEQQAMLNYVGAESLEDLTAQIVPESIRLGRELNVGASNGEAAGLAYIRQLADKNQVFKS 84

Query: 68  FLGAGFYDHHIPKAV--DALSSRGEFYTAYTPYQPEAAQGTLQAIFEFQTAVCRLLDMDC 125
           ++G G++   +P  +  + L + G +YTAYTPYQPE AQG L+AI  FQ     L  +D 
Sbjct: 85  YIGMGYHGTEVPNVILRNVLENPG-WYTAYTPYQPEIAQGRLEAILNFQQLSIDLTGLDL 143

Query: 126 ANASVYDGGSALFEAMMMAVRATRRRK---LVIDEALSPIYRTMLASYTSNLQLELVTVP 182
           A+AS+ D  +A  EAM +A R ++ +K     + + + P    ++ +       ++VT P
Sbjct: 144 ASASLLDEATAAAEAMALAKRVSKAKKANTFFVADDVFPQTLDVVKTRAECFGFDIVTGP 203

Query: 183 HRDGLSDMDALKASVDDTCAAVVVQNPNFFGAITDFTDLFTHARAHKALGVISVYPVMQS 242
                    A +A+  D     + Q  N  G +TDFT+LF   RA   +  +    +   
Sbjct: 204 ---------AAEAANHDDLFGALFQYTNRQGQLTDFTELFAQLRAKNVIVTVGADIMSLV 254

Query: 243 VLKTPGEMGADIAVADGQSIGQPLSFGGPYLGIMTCTKPLVRQIPGRIVGRTQDVDGRTG 302
           +LK+PG MGAD+     Q  G P+ FGGP+           R +PGRI+G ++D  G+T 
Sbjct: 255 LLKSPGAMGADVVFGSAQRFGVPMGFGGPHAAFFVSKDEHKRSMPGRIIGVSKDTRGKTA 314

Query: 303 YVLTLQAREQHIRRAKATSNICSNQALCALRSLIHLTLLGPEGL 346
             + +Q REQHIRR KA SNIC+ Q L A  +  +    GP+GL
Sbjct: 315 LRMAMQTREQHIRREKANSNICTAQVLLANMASFYAVFHGPQGL 358



 Score = 33.1 bits (74), Expect = 4e-05
 Identities = 66/333 (19%), Positives = 127/333 (38%), Gaps = 32/333 (9%)

Query: 46  SEMDVCSRLEALSARNRTDVVSFLGAGFYDHHIPKAVDALSSRGEFYTAYTPYQP-EAAQ 104
           SE ++   ++ L  ++     S +  G     +  AV+ +      +    P+ P E AQ
Sbjct: 485 SETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPSEQAQ 544

Query: 105 GTLQAIFEFQTAVCRLLDMDCANASVYDGGSALFEAMMMAVRATRRRKLVIDEALSPIYR 164
           G  Q I E    +  +   D        G    + A ++A+R     +      +  I +
Sbjct: 545 GYTQLIGELSDWLVDITGYDAVCMQPNSGAQGEY-AGLLAIRKYHESRGEGHRDVCLIPQ 603

Query: 165 TMLASYTSNLQLE----LVTVPHRDGLSDMDALKAS---VDDTCAAVVVQNPNFFGA--- 214
           +   +  ++ QL     +VT   + G  D+D L+A    V +  + +++  P+  G    
Sbjct: 604 SAHGTNPASAQLAGMKVVVTACDKQGNVDLDDLRAKAAEVAENLSCIMITYPSTHGVYEE 663

Query: 215 -ITDFTDLFTHARAHKALGVISVYPVMQSVLKTPGEMGADIAVAD-GQSIGQPLSFGGPY 272
            + +  D+         L   ++    Q  L  PG +GAD++  +  ++   P   GGP 
Sbjct: 664 TVREICDIIHQHGGQVYLDGANMNA--QVGLTAPGFIGADVSHLNLHKTFAIPHGGGGPG 721

Query: 273 LGIMTCTKPLVRQIPGRIVGRTQDVDGRTGYVLTLQAREQHIRRAKATSNICSNQALCAL 332
           +G +   K L   + G  V +        G                A S      A    
Sbjct: 722 MGPIGVKKHLAPFVAGHAVVKQGIESDNNG----------------AVSAAPFGSAGILP 765

Query: 333 RSLIHLTLLGPEGLVRTAELSMERARYAAERLT 365
            S +++ LLG +GL ++ + +M  A Y  ++L+
Sbjct: 766 ISWMYIKLLGSKGLKQSTQTAMLNANYLTKKLS 798