Pairwise Alignments

Query, 376 a.a., lipid A disaccharide synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 393 a.a., lipid-A-disaccharide synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  187 bits (474), Expect = 6e-52
 Identities = 115/335 (34%), Positives = 181/335 (54%), Gaps = 13/335 (3%)

Query: 10  GELSGDMHGAALLEALRALAPDLSCTGMGGPYLRAAGQQAMLRVEDLSVMGITEVIAYLP 69
           GELSGD+ GA L++AL+A  PD    G+GGP + A G +++  +E+L+VMGI EV++ LP
Sbjct: 14  GELSGDILGAGLVKALKARHPDARFVGIGGPRMEALGFESLFAMEELAVMGIVEVLSRLP 73

Query: 70  RIFSMLRDIRAELARTRPDAVVLIDAPEFNFRVAKAATDLGIPVYYYISPKIWAWRTGRV 129
           R+  +   + ++L   +PD  + IDAP+FN  V       GI   +Y+SP +WAWR  R+
Sbjct: 74  RLLKVRSSLVSQLLALKPDCFIGIDAPDFNIGVELKLKQQGIKTVHYVSPSVWAWRPKRI 133

Query: 130 QFIKRHVRRMLSILPFEVDFYRRHGMEVDYVGNPLVDMVDWPALAAIAPVAGRIGL---- 185
             I +    +LS+LPFE  FY +H +   +VG+ L D  D P   + A     +GL    
Sbjct: 134 FKIAKATNMVLSLLPFEKAFYDQHQVPCTFVGHTLAD--DIPLELSKADARETLGLDRDA 191

Query: 186 -----MPGSRRKEVESLMPAFGDAARLMLEHRPGLEFHC-MRAPSTTEAALRALWPQDIP 239
                +PGSR  E++ L   F  AA  + E  P + F   +      E  L AL      
Sbjct: 192 EYLAILPGSRGGELKMLSEPFIKAAVAIKEALPDVRFITPLVNEKRREQFLTALETHAPG 251

Query: 240 LHIVAPEDRYHAVRSC-QMLIAASGTATLETALIGTPTLVTYKVSPFSYWLGRKLVKVRF 298
           L I   + +   + +    ++ ASGTATLE  L+  P +V Y+V+P +Y +  +++ ++ 
Sbjct: 252 LEIQLFDGQSREIMAASDGILLASGTATLEAMLVKRPMVVAYRVAPLTYSIASRMMLIKR 311

Query: 299 AALPNLVLDREVFPELLQEKATGPVIAQHAAAWLD 333
            +LPNL+  +++ PEL+Q   T   IA    A ++
Sbjct: 312 YSLPNLLSGKDLVPELIQADCTPQKIASEVVAMMN 346