Pairwise Alignments

Query, 376 a.a., lipid A disaccharide synthase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 393 a.a., lipid-A-disaccharide synthase LpxB from Phaeobacter inhibens DSM 17395

 Score =  165 bits (417), Expect = 2e-45
 Identities = 119/388 (30%), Positives = 187/388 (48%), Gaps = 24/388 (6%)

Query: 5   IWINTGELSGDMHGAALLEALRALAPDLSCTGMGGPYLRAAGQQAMLRVEDLSVMGITEV 64
           ++I  GE SGD  G AL+  LR L PD+S  G+GG  +   G  +   + +LSVMG+ EV
Sbjct: 5   VFILAGEPSGDRLGGALMAGLRQLRPDVSFEGVGGALMAEQGLVSRFDMSELSVMGLAEV 64

Query: 65  IAYLPRIFSMLRDIRAELARTRPDAVVLIDAPEFNFRVAK-AATDLGIPVYYYISPKIWA 123
           +    ++   +R+    +   +PD ++ ID+P+F+ RVA     +  I   +Y++P +WA
Sbjct: 65  LPKYRQLKRRIRETAEAVLDMKPDVMITIDSPDFSLRVAALVKEESSIRTVHYVAPSVWA 124

Query: 124 WRTGRVQFIKRHVRRMLSILPFEVDFYRRHGMEVDYVGNPLVDMVDWPA--LAAIAPV-- 179
           WR  R + + + +  +L++LPFE  + +  GME D+VG+P+V      A  +AA      
Sbjct: 125 WRPKRAEKMAKVIDHVLALLPFEPPYMQAAGMECDFVGHPVVGEPQATAEEIAAFRQAYQ 184

Query: 180 ---AGRIGLMPGSRRKEVESLMPAFGDAARLMLEHRPGLEFHCMRAPSTTEAALRAL--W 234
                 +  +PGSRR EV  L P FG A +   +  P        A    +     L  W
Sbjct: 185 LDDTPTVLALPGSRRSEVTRLAPVFGAALKQFQDSHPEYRIVVPAAGPVADLVRSHLAEW 244

Query: 235 PQDIPLHI--------VAPEDRYHAVRSCQMLIAASGTATLETALIGTPTLVTYKVSPFS 286
             D  + I        VA   +  A  +  + +AASGT +LE A   TP ++ YK    +
Sbjct: 245 -SDTAVVIDPNTLDGEVAKAHKRAAFAAADLALAASGTVSLELAAARTPMVIAYKFQWLT 303

Query: 287 YWLGRKLVKVRFAALPNLVLDREVFPELLQEKATGPVIAQHAAAWLDAPEALAAVRSELD 346
           + + R++  +    L NLV D  V PE L  + T   IA+   A +      +A  S + 
Sbjct: 304 WHIMRRMALIDTVTLVNLVSDTRVVPECLGPECTPEAIAK---ALIKVKADPSAQSSAMA 360

Query: 347 VLRTMLGEPG--AAGRAARIIIDDLTGR 372
                LGE G     RAAR ++D L+ +
Sbjct: 361 TTMERLGEGGEDPGLRAARAVLDRLSAQ 388