Pairwise Alignments

Query, 274 a.a., permease component of zinc ABC transporter (Dmitry Rodionov) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 269 a.a., Zinc ABC transporter, permease (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  170 bits (430), Expect = 3e-47
 Identities = 88/256 (34%), Positives = 159/256 (62%)

Query: 3   DALAYDFVRNACAAAVLASIACGIIGTLVVVNRIVFLAGGVAHAAYGGIGIAVHWGLPML 62
           D L Y F ++A   ++LASIACGIIGT +V  R+VF++GG+ HA++GGIG+ +  G+  +
Sbjct: 2   DLLRYTFFQHALLGSLLASIACGIIGTYIVTRRLVFISGGITHASFGGIGLGLFAGISPI 61

Query: 63  PCTVGFSLAASLGMAHIAYRHAEKADAAIGLLWAAGMAFGIILLDLTPGYRADLMSFLFG 122
                FS+ ++ G+  ++ R   + D+AI + W  GMA GI+   L+PG+  DL ++LFG
Sbjct: 62  LSAAVFSVLSAFGVEWLSRRKDMREDSAIAVFWTLGMALGIMFSFLSPGFAPDLSAYLFG 121

Query: 123 SILAVPEGDLLLMLVVDVGLLLIVGLCHQTLLVASFDPEFAEARGLPVKATFLLVVGMTA 182
           +IL + + DL ++ ++ + L     L  + ++  +FD EFA ++ +PV+    +++   A
Sbjct: 122 NILTINQADLWMLGILALILTGFFYLFIRPIVYIAFDREFARSQKIPVEIFEYVLMMFIA 181

Query: 183 LGVVLLIRIVGLVLVMALLTIPPFIAQRRARSLPRMMLAATLWSLVFCLSGLWLAYRFDL 242
           L +V  +R+VG+VL ++LLTIP   A     S  +++  +     + CL GL+++Y + +
Sbjct: 182 LTIVACLRMVGIVLAISLLTIPQMTANLFTYSFKKIIWLSIGIGFLGCLGGLFISYHWKV 241

Query: 243 TSGAAIIAAAVVGFSL 258
            SGA+II  +++ +++
Sbjct: 242 PSGASIIFFSILIYAV 257