Pairwise Alignments

Query, 212 a.a., ribosomal protein S3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

 Score =  234 bits (596), Expect = 1e-66
 Identities = 118/208 (56%), Positives = 153/208 (73%), Gaps = 1/208 (0%)

Query: 1   MGQKVHPFGFRLGYNKNWQSRWYSK-KEYPAFVFEDHNIRKFVKKTLYHAGLAKIEIERA 59
           MGQKVHP G RLG  K W + W++  K++   +  D  +R+++ K L +A L++I IER 
Sbjct: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60

Query: 60  GGKVRLILSTARPGIVIGRKGVEIEKLRADLRKKFKREFAIEVNEIRRPEVESQLVAENI 119
              +R+ + TARPG+VIG+KG ++EKLRA + K       I + E+R+PE++ QLVA++I
Sbjct: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120

Query: 120 ALQLERRVAFRRAMKRTVSMARKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
           A QLERRV FRRAMKR V  A + GA+GIKV  SGRL GAEIAR+EWYR+GRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180

Query: 180 DIDFGFAEARTTYGVIGVKVWIFKGELL 207
           DID+  + A TTYGVIGVKVWIFKGE+L
Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIFKGEIL 208