Pairwise Alignments

Query, 408 a.a., general secretion pathway protein F, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 405 a.a., type II secretion system protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  627 bits (1618), Expect = 0.0
 Identities = 310/407 (76%), Positives = 364/407 (89%), Gaps = 3/407 (0%)

Query: 1   MASFSYTARNENGVKMEGVIDAESTEAARAILFSRGYVPLEVKAGAGGGFSLGLGALADA 60
           M ++ YTA NE+GV M+G IDAES + ARA+L SRGYVP++VK     G S   GAL D 
Sbjct: 1   MPTYVYTALNEHGVNMQGTIDAESPDTARALLLSRGYVPMKVKTQ---GASFDFGALGDI 57

Query: 61  LSPIPPKELILFTKQFRTLFQAGIPITQLLQVLQNQTEHKRLKAIAAEMSQAIMGGATLY 120
           L+P+ PKELILFTKQFRTLFQAGIPITQLLQVLQNQTE KRLK IAA+M+Q+I+GG+TLY
Sbjct: 58  LNPVKPKELILFTKQFRTLFQAGIPITQLLQVLQNQTESKRLKQIAADMAQSIVGGSTLY 117

Query: 121 DAFRAHPKVFSELYCSMMRAGEASGALGEVMDRLVYLLEHEHKIRSDIKSALRYPKMVMG 180
           DAFRAHP+VFSELYCSMMRAGEASGALG+VM+RLVYLLEHEHKIRSDIKSA+RYPKMV+ 
Sbjct: 118 DAFRAHPRVFSELYCSMMRAGEASGALGDVMERLVYLLEHEHKIRSDIKSAMRYPKMVVS 177

Query: 181 ALAVAFFVLLNLVIPKFVLIFSQARITLPWPTKIAIGMHYVFSTYWYVVLAVVVAGTVAY 240
           AL  AFF+LLN+VIPKFV+IF++A+I LPWPT++A+GMHY+ +TYW +VL ++VA    Y
Sbjct: 178 ALLAAFFILLNVVIPKFVVIFARAKIELPWPTQVAMGMHYIMTTYWPIVLGLLVAAIAGY 237

Query: 241 KYWVRTEDGRYWRDRLVLRLPGVGPVIQKSVMARFASIFAILQSSGVSVLDALDVLNNTI 300
           K+WVRT  G+YWRD  +L +P +GPV+QKSVMARFASIF+ILQSSGV+VLDALDVL NTI
Sbjct: 238 KWWVRTPAGKYWRDYTLLHVPIIGPVLQKSVMARFASIFSILQSSGVTVLDALDVLTNTI 297

Query: 301 GNAAIAREFTRIQDQLREGRGIAEPLRTARFFTPLVVNMVAIGEESGSLDAMLNDVARHY 360
           GNAAIA EF +IQD+LREGRGIA+PL++A+FFTPLV+NMVAIGEESGSLD+MLNDVARHY
Sbjct: 298 GNAAIASEFRKIQDKLREGRGIADPLKSAKFFTPLVINMVAIGEESGSLDSMLNDVARHY 357

Query: 361 DEEVEYAVAGMAEAIGPVLIVALAAVVGFFALAIFMPMWDLTQMAGK 407
           DEEVEYAVAGM+EAIGPVLI+ALAAVVGFFALAIFMPMWDLT++A K
Sbjct: 358 DEEVEYAVAGMSEAIGPVLIIALAAVVGFFALAIFMPMWDLTKVARK 404