Pairwise Alignments

Query, 408 a.a., general secretion pathway protein F, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 405 a.a., type II secretion system inner membrane protein GspF from Dyella japonica UNC79MFTsu3.2

 Score =  204 bits (520), Expect = 3e-57
 Identities = 128/405 (31%), Positives = 208/405 (51%), Gaps = 7/405 (1%)

Query: 1   MASFSYTARNENGVKMEGVIDAESTEAARAILFSRGYVPLEVKAGAGGGFSLGLGALADA 60
           M+ F Y A ++ G  ++G ++A S E   A L  +G+ PLE +     G + GLG L   
Sbjct: 1   MSQFHYRAVSDGGDIVQGEMEAASVEEVIARLQDQGHTPLEARPANEAGSAGGLGGLFKR 60

Query: 61  LSPIPPKELILFTKQFRTLFQAGIPITQLLQVLQNQTEHKRLKAIAAEMSQAIMGGATLY 120
             P    +L  FT Q  TL  AG P+ + L +L +  E +R K +   +   + GG TL 
Sbjct: 61  -GPFTGDQLAQFTHQLATLLGAGQPLDRALGILMDLPEGERAKKLIERVRDRVRGGTTLS 119

Query: 121 DAFRAHPKVFSELYCSMMRAGEASGALGEVMDRLVYLLEHEHKIRSDIKSALRYPKMVMG 180
            AF     VF +LY S++RAGEA G+L + + RL   LE   ++R  I +AL YP  +M 
Sbjct: 120 QAFDEEHGVFPKLYISLVRAGEAGGSLEDTLRRLADYLERSQQLRGSIVNALIYPAFLMV 179

Query: 181 ALAVAFFVLLNLVIPKFVLIFSQARITLPWPTKIAIGMHYVFSTYWYVVLAVVVAGTVAY 240
            +  +  +LL  V+P+FV IF   ++ +P  T+  + +  +  ++W++++ V+  G   +
Sbjct: 180 GVLGSLVLLLAYVVPQFVPIFEDMQVPIPLITQAVLALGNLIQSWWWLLMLVIGGGIFVW 239

Query: 241 KYWVRTEDGRY---WRDRLVLRLPGVGPVIQKSVMARFASIFAILQSSGVSVLDALDVLN 297
           +   R  D  Y   W  RL L+   VGP++ K   AR A     L  +GV +L AL +  
Sbjct: 240 R--ARLRDPVYRLAWHGRL-LQKRLVGPLLLKVETARIARTLGTLVKNGVPLLSALTIAR 296

Query: 298 NTIGNAAIAREFTRIQDQLREGRGIAEPLRTARFFTPLVVNMVAIGEESGSLDAMLNDVA 357
               N A+     +  +Q++ G G++  L  ++ F  L + MV +GEE+G LD ML  VA
Sbjct: 297 QVTSNRALDEALAQAAEQVKGGAGLSLALAQSQRFPRLALQMVQVGEEAGQLDTMLLKVA 356

Query: 358 RHYDEEVEYAVAGMAEAIGPVLIVALAAVVGFFALAIFMPMWDLT 402
             ++ E + A+  +  A+ P L + +  +V     AI +P+  LT
Sbjct: 357 DTFELESKRAIDRLLAALVPALTIVMTIMVAIIMAAILLPLLSLT 401