Pairwise Alignments

Query, 408 a.a., general secretion pathway protein F, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 406 a.a., type II secretion system protein (RefSeq) from Shewanella sp. ANA-3

 Score =  253 bits (646), Expect = 7e-72
 Identities = 138/401 (34%), Positives = 226/401 (56%), Gaps = 3/401 (0%)

Query: 1   MASFSYTARNENGVKMEGVIDAESTEAARAILFSRGYVPLEVKAGAGGGFSLGLGALADA 60
           M  + Y  R+  G  + G +DA S  AA  +L +RG +PLEVK  A    S  L  L   
Sbjct: 1   MPVYQYRGRSGQGQAVTGQLDAASEGAAADMLLARGIIPLEVKV-AKETKSFTLAQLFKR 59

Query: 61  LSPIPPKELILFTKQFRTLFQAGIPITQLLQVLQNQTEHKRLKAIAAEMSQAIMGGATLY 120
              +   EL +FT+Q  +L ++GIPI + +  L      +R+K    ++S+ +  G  L 
Sbjct: 60  --KVGLDELQIFTRQMYSLTRSGIPILRAIAGLSETAHSQRMKDALNDISEQLTAGRPLS 117

Query: 121 DAFRAHPKVFSELYCSMMRAGEASGALGEVMDRLVYLLEHEHKIRSDIKSALRYPKMVMG 180
            A   HP VF  L+ SM+  GE +G L +   +L   +E E + R  IK+A+RYP  V+ 
Sbjct: 118 SAMNQHPDVFDSLFVSMVHVGENTGKLEDAFIQLSGYIEREQETRRRIKAAMRYPIFVLI 177

Query: 181 ALAVAFFVLLNLVIPKFVLIFSQARITLPWPTKIAIGMHYVFSTYWYVVLAVVVAGTVAY 240
           A+A+A  +L  +VIPKF  +F++    LPW TK+ IG   +F  YW ++L +++   +  
Sbjct: 178 AIALAMVILNIMVIPKFAEMFARFGADLPWATKVLIGTSNLFVNYWPLMLVILLGTIIGI 237

Query: 241 KYWVRTEDGRYWRDRLVLRLPGVGPVIQKSVMARFASIFAILQSSGVSVLDALDVLNNTI 300
           +YW  TE G    D+  L +P VG +I++S ++R+   F+++ S+GV +  AL ++ + +
Sbjct: 238 RYWHHTEKGEKQWDKWKLHIPAVGSIIERSTLSRYCRSFSMMLSAGVPMTQALSLVADAV 297

Query: 301 GNAAIAREFTRIQDQLREGRGIAEPLRTARFFTPLVVNMVAIGEESGSLDAMLNDVARHY 360
            NA +  +   ++  +  G  +      ++ FTPLV+ MVA+GEE+G +D +LND A  Y
Sbjct: 298 DNAYMHDKIVGMRRGIESGESMLRVSNQSKLFTPLVLQMVAVGEETGQIDQLLNDAADFY 357

Query: 361 DEEVEYAVAGMAEAIGPVLIVALAAVVGFFALAIFMPMWDL 401
           + EV+Y +  +   + P+LI  +AA+V   AL I++PMWD+
Sbjct: 358 EGEVDYDLKNLTAKLEPILIGIVAAIVLVLALGIYLPMWDM 398