Pairwise Alignments

Query, 408 a.a., general secretion pathway protein F, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 423 a.a., type II secretion system protein (RefSeq) from Shewanella sp. ANA-3

 Score =  216 bits (549), Expect = 1e-60
 Identities = 128/408 (31%), Positives = 215/408 (52%), Gaps = 14/408 (3%)

Query: 3   SFSYTARNENGVKMEGVIDAESTEAARAILFSRGYVPLEVKAGAGGGFSLGLGALADALS 62
           +F +   N +G K  G +   S    R+ L S+G  P  V+  +   F LG     DA  
Sbjct: 25  TFEWKGLNRDGQKTSGELRGASAAEIRSQLKSQGVNPKTVRKQSAALFKLG-----DA-- 77

Query: 63  PIPPKELILFTKQFRTLFQAGIPITQLLQVLQNQTEHKRLKAIAAEMSQAIMGGATLYDA 122
            I P ++ + T+Q  T+  AG+P+   +++L    E  +++ +   +   I  G  L D+
Sbjct: 78  KISPMDIAMITRQIATMLAAGVPLVTTIELLGRGHEKAKMRELLGSILSEIQSGIPLSDS 137

Query: 123 FRAHPKVFSELYCSMMRAGEASGALGEVMDRLVYLLEHEHKIRSDIKSALRYPKMVMGAL 182
            R H + F +LY  ++ AGE SG+L  V DR+    E    ++S IK A+ YP  V+   
Sbjct: 138 LRPHRRYFDDLYVDLVAAGEHSGSLDVVFDRIATYREKSEALKSKIKKAMFYPAAVVVVA 197

Query: 183 AVAFFVLLNLVIPKFVLIFSQARITLPWPTKIAIGMHYVFSTYWYVVLAVVVAGTVAYKY 242
            +   +LL  V+P+F  IF      LP  T++ + +     + WY+ L  +VAG   +  
Sbjct: 198 ILVTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSSWYIFLGAIVAGVFLF-- 255

Query: 243 WVRTE-DGRYWRDRL---VLRLPGVGPVIQKSVMARFASIFAILQSSGVSVLDALDVLNN 298
            VR   + +  RDR+   VL++P +GP++ K  MARFA   A   ++GV ++D L+    
Sbjct: 256 -VRAHRNSQMVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFAAGVPLIDGLESAAG 314

Query: 299 TIGNAAIAREFTRIQDQLREGRGIAEPLRTARFFTPLVVNMVAIGEESGSLDAMLNDVAR 358
             GNA   +   +I+ ++  G  +   +RT   F  +++ MV IGEESGSLD MLN VA 
Sbjct: 315 ASGNAVYRKAILKIRQEVMAGMQMNVAMRTTGLFPDMLIQMVMIGEESGSLDNMLNKVAN 374

Query: 359 HYDEEVEYAVAGMAEAIGPVLIVALAAVVGFFALAIFMPMWDLTQMAG 406
            Y+ +V+ AV G++  I P+++V +  VVG   +A+++P++ + ++ G
Sbjct: 375 IYEMQVDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKVVG 422