Pairwise Alignments

Query, 243 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 245 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 61.6 bits (148), Expect = 1e-14
 Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 15/237 (6%)

Query: 6   AIFVAAGFLQGFAGFGAGLLAVPLLLLRFDITVAVPVCVLASIVLNAQLCVSYRDALSW- 64
           A+ +      GFAG G G L VPLL L      A+     A+I+L   + + +    SW 
Sbjct: 14  AVLITGISKSGFAG-GVGGLTVPLLAL------AISPATAAAIMLPLLIYMDFLSVRSWW 66

Query: 65  GRIMP-----LLLGSIPGLILGSLVLVHAPPVLTRSVLGGILVAYGLWGLWAKSATGMMG 119
           G+  P     LL  +I G+ +   +         R++LG + + +GL+GL     T    
Sbjct: 67  GQHNPRQLWILLPAAIVGIGIAYWLFDRLNEDYLRAILGCVSLGFGLYGLILGDKT--QA 124

Query: 120 SPRPVYGYAAGMASGAMGAAFSANGPAAIVYVSLTDWPKNTIKGTLAGYFLANNVATLAA 179
           +P P+ G   G+ +G       A GP    Y+      K     T   +F   N+  L  
Sbjct: 125 TPSPLVGRLCGLTAGFTSFVAHAGGPPLNAYLLPLRLAKPEFLATAVVFFAVVNLVKLVP 184

Query: 180 EAASGLLTLQVALAGMVGAAGIGLGGWMGVRACSRLGERDYRRAMFALLFLMGGNLL 236
            +  G +     L  ++ A    LG  +G+    ++ +R ++R +  L+ L+G  LL
Sbjct: 185 YSLLGQINQGNILISLLLAPLAWLGVKLGLAIQDKISDRLFKRIILILMVLVGIRLL 241