Pairwise Alignments

Query, 377 a.a., riboflavin biosynthesis protein RibD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 350 a.a., riboflavin biosynthesis protein RibD from Pedobacter sp. GW460-11-11-14-LB5

 Score =  144 bits (364), Expect = 3e-39
 Identities = 90/250 (36%), Positives = 126/250 (50%), Gaps = 16/250 (6%)

Query: 8   FMREAIALAERGRWYAAPNPTVGAVLVRDGEVAARGWHTGYGKPHAEVECLRDAASKGVD 67
           +++  + LA       +PNP VG V+V DG++   G+H  YGK HAE   ++       +
Sbjct: 6   YIKRCLDLAALALGNVSPNPMVGCVIVVDGKIIGEGYHQEYGKSHAEPNAIKAVFDHFGN 65

Query: 68  PAH-----CTLVVTLEPCNHHGKTPPCSHAIVEAGITRVVVGLADPNPVASG-GAEYLRA 121
            A       T  V LEPC H GKTPPC+  +V+  + +VV+G  DP     G G E LR 
Sbjct: 66  EAENLLKQATAYVNLEPCAHFGKTPPCADLLVKHQLKKVVIGNRDPFSGVDGKGIEKLRN 125

Query: 122 HGVTVDMGVCEQECHDLVADFLTWKLTDLPYVILKLASTLDGRIATRSGHSQWISGAEAR 181
            G+ V  G+ + EC      F T      PY+ILK A T +G  AT+ GH +WISGA A+
Sbjct: 126 AGIEVLSGILDDECRYFNRRFFTRIQKQRPYIILKWAETANGYFATKDGHQKWISGALAK 185

Query: 182 AAVHELRARIGEAGGAVLVGGTTLYTDDPQLTARVAP------LPRRQPMAVVATRHVPH 235
              H+ R+       A+L+G  T   D+PQLT+R  P      L   + + V  T H+ +
Sbjct: 186 RLAHQWRSE----EDAILIGKQTAIMDNPQLTSREWPGKNPIRLVIDKNLQVPVTNHIFN 241

Query: 236 HDALPRIFRE 245
             A   IF E
Sbjct: 242 TAAKTIIFNE 251