Pairwise Alignments

Query, 377 a.a., riboflavin biosynthesis protein RibD (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 419 a.a., riboflavin biosynthesis protein RibD (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  467 bits (1202), Expect = e-136
 Identities = 248/410 (60%), Positives = 283/410 (69%), Gaps = 41/410 (10%)

Query: 5   FTPFMREAIALAERGRWYAAPNPTVGAVLVRDGEVAARGWHTGYGKPHAEVECLRDAASK 64
           F  FMREAIALA RGRW AAPNPTVGAVLVRDG+V ARG+HT  G PHAEVECLRDAA+ 
Sbjct: 7   FEIFMREAIALARRGRWRAAPNPTVGAVLVRDGQVVARGYHTACGMPHAEVECLRDAAAN 66

Query: 65  GVDPAHCTLVVTLEPCNHHGKTPPCSHAIVEAGITRVVVGLADPNPVASGGAEYLRAHGV 124
           GVDPA CTL+VTLEPCNHHGKTPPCS A++ AGI  VVVG+ADPNPVA GGAE+LR HGV
Sbjct: 67  GVDPAACTLMVTLEPCNHHGKTPPCSQAVLAAGIRHVVVGMADPNPVARGGAEFLRQHGV 126

Query: 125 TVDMGVCEQECHDLVADFLTWKLTDLPYVILKLASTLDGRIATRSGHSQWISGAEARAAV 184
            VDMGVCEQ+C DLVADF+TWK TDLPYVILKLASTLDGRIATR+GHSQWIS A +R  V
Sbjct: 127 RVDMGVCEQDCRDLVADFVTWKKTDLPYVILKLASTLDGRIATRAGHSQWISCAASRRRV 186

Query: 185 HELRARIGEAGGAVLVGGTTLYTDDPQLTARV--------------------APLPRRQP 224
           H +RA  G AGGAVLVGG TL+ D+P LTAR                     A  PRRQP
Sbjct: 187 HAIRAGAGHAGGAVLVGGGTLFADNPLLTARCGDFSDAFPAAPQGGCAGIDEADAPRRQP 246

Query: 225 MAVVATRHVPHHDALP---RIFRERPGQCVVWTDSTGAGTEAADALRTSGVCIMALP--- 278
           +AV  T  +    A      + ++R    + WT  T A + AAD +R  GV +  LP   
Sbjct: 247 LAVAVTSRMDEVAARAGDLALLQQRAADTIFWTTETAAASPAADTVRAMGVRVWGLPAAS 306

Query: 279 ---------------LTPSGRLDLRAGLTRLRADHGVEHVLCEGGGKLALSLLEAGLVGE 323
                           T +  LDLRAGL RLRA+ G  +VLCEGGG+L L+LLEAGLV E
Sbjct: 307 AAHEHGETGKPGETGATSAVGLDLRAGLARLRAEAGCLYVLCEGGGQLGLALLEAGLVHE 366

Query: 324 FHLHMAPKIIGDAEAALLFDGRAPLHMDEALRLRMTGIERRGDDCIMILR 373
           F LH+APK++GD  A  LFDGRAPL MD+AL LR+      GDD I+ LR
Sbjct: 367 FELHLAPKVLGDNAARPLFDGRAPLRMDDALGLRVADTAPSGDDIIVTLR 416