Pairwise Alignments

Query, 409 a.a., 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 404 a.a., GTP cyclohydrolase II (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  395 bits (1016), Expect = e-115
 Identities = 204/395 (51%), Positives = 272/395 (68%), Gaps = 3/395 (0%)

Query: 5   KAEEAIDAIRKGEMIILVDDEDRENEGDLTIAAQHVTPEVINFMATHGRGLICLALSPEW 64
           + E+AI   ++G+ +I+VDDEDRENEGDL IAA+ +TPE +NFM  H RG++C  ++   
Sbjct: 8   RIEDAIADFKEGKFVIVVDDEDRENEGDLIIAAEKITPEKVNFMLKHARGVLCAPITVSR 67

Query: 65  VDKLQLPLMARRNESKFGTNFTVSIEARRGVTTGISAADRATTILTAVADDVKAEDIV-T 123
             +L LP     N S  GT FTV+I+   G +TG+SA+DRA TI  A+AD          
Sbjct: 68  CKELDLPHQVSDNTSVLGTPFTVTIDKLEGCSTGVSASDRAATI-QALADPASTPATFGR 126

Query: 124 PGHIFPLRAQKGGVMVRAGQTEGSVDLAKLANLKPAAVICEIMREDGEMARMPDLIEFAE 183
           PGHI PL AQ+ GV+ RAG TE ++D+A+LA L PA  + EIM +DG MAR+P+L   A+
Sbjct: 127 PGHINPLYAQEKGVLRRAGHTEATIDMARLAGLYPAGALMEIMSDDGTMARLPELRAMAD 186

Query: 184 KHNMKIATIKDLIRYRMQSGLLSVKRVGEAKMPTRYGDFQIIAYENELHDETHIALVKGD 243
           +H +K+ +I DLI YR++   +  K V E  MPT +G F++I +  + +   H+A+ KG 
Sbjct: 187 EHGLKLISIHDLIAYRLKQESIVEKGV-EVNMPTEHGMFRLIPFRQKSNGLEHMAIFKGT 245

Query: 244 ISPSEPVLVRVHSECLTGDVLGSLRCDCGGQLAAALCQIAAKGSGVLLYMRQEGRGIGLG 303
            +  EP+LVRVHS C TGD+LGS RCDCG QL  A+  I  +G GV++Y+ QEGRGIGL 
Sbjct: 246 WNEDEPILVRVHSSCATGDILGSHRCDCGEQLHKAMEMIEKEGKGVVVYLNQEGRGIGLM 305

Query: 304 NKIKAYGLQDQGYDTVEANHKLGFKADLRDYGIGAQILVDLGVRKMRMMTNNPKKIVGLE 363
            K+KAY LQ+ G DTV+AN  LG  AD RDYG+GAQIL +LGV KM+++TNNP K VGLE
Sbjct: 306 EKMKAYKLQEDGMDTVDANLCLGHLADERDYGVGAQILRELGVHKMKLLTNNPVKRVGLE 365

Query: 364 GYGIEVVERVPIELESCAFNEEYLRTKKEKMGHLL 398
            YG+E+VE VP+E     +NE YLRTKKE+MGH L
Sbjct: 366 AYGLEIVENVPVETVPNPYNERYLRTKKERMGHTL 400