Pairwise Alignments

Query, 879 a.a., alanyl-tRNA synthetase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 872 a.a., alanine--tRNA ligase from Pseudomonas fluorescens SBW25-INTG

 Score =  797 bits (2059), Expect = 0.0
 Identities = 420/874 (48%), Positives = 580/874 (66%), Gaps = 24/874 (2%)

Query: 6   EIRRRFLEFYKAHGHEAVRSSSLVPKDDPSLLFTNAGMVQFKKIFLGQEKRAYSRATTSQ 65
           EIR  FL F++  GH  V SSSL+P +DP+LLFTNAGM QFK  FLGQEKRAY+RAT+SQ
Sbjct: 5   EIREAFLRFFEEQGHTRVASSSLIPGNDPTLLFTNAGMNQFKDCFLGQEKRAYTRATSSQ 64

Query: 66  KCLRVGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKEDAIKFAWKFLTEELKLPKERL 125
           KC+R GGK++DLENVG TARHHTFFEMLGNFSFGDYFK+DAI FAW FLT  LKLPKE+L
Sbjct: 65  KCVRAGGKNSDLENVGYTARHHTFFEMLGNFSFGDYFKKDAITFAWTFLTGVLKLPKEKL 124

Query: 126 YATVFRDDDEAEQLWLKHSDIPAERIYRMGE-------KDNFWSMGDTGPCGPCSEILID 178
           + TV+  DDEA  +W +   +P ER+ R+G+        DNFW+MGDTGPCGPC+EI  D
Sbjct: 125 WVTVYATDDEAYDIWTQQIGVPVERMIRIGDNKGAPYASDNFWTMGDTGPCGPCTEIFYD 184

Query: 179 QGEHMTCGPDCGIGKCDCDRFLEIWNLVFMQYDQDATGKREPLPKPSIDTGMGLERITAV 238
            G  +  GP  G  + D DR++EIWN VFMQ+++ A G   PLP PS+DTGMGLERI+AV
Sbjct: 185 HGADIWGGPP-GSPEEDGDRYIEIWNNVFMQFNRTADGVLHPLPAPSVDTGMGLERISAV 243

Query: 239 CQGVFSNFDTDIFQAIIQYTCGLANVSYRSDDETDTALRVIADHSRAIAFMITDGILPSN 298
            Q V SN++ D+F  ++  +      +    +E+ ++L+V++DH R+  F+I DG+LPSN
Sbjct: 244 MQHVHSNYEIDLFTNLLSASAAAIGCA----NESQSSLKVVSDHIRSCGFLIADGVLPSN 299

Query: 299 EGRGYVLRRLIRRAYRFGRLIGLTDTFLHKTALKVVDIMGDDYPELRENSDFMARVVREE 358
           EGRGYVLRR+IRRA R G  +G T +F +K    +V  MG+ +PEL++    + RV++ E
Sbjct: 300 EGRGYVLRRIIRRACRHGNKLGATGSFFYKIVAALVAEMGEAFPELKQQQGNIERVLKAE 359

Query: 359 EDRFNRTLDKGLSMLEDELATLSASGAAHVPGDIAFRLYDTFGFPLDIVNDIAEKRGFSV 418
           E++F++TL+ GL +LE +LA L  +    VPGD+ F+LYDT+GFP+D+  DIA +R  ++
Sbjct: 360 EEQFSKTLEHGLKILEQDLAELKGT---VVPGDVVFKLYDTYGFPMDLTADIARERELTI 416

Query: 419 DEDGFKALMKEQKERAKAAWKGSGEKDIASRFQPLLEEGMRSEFIGYDHLCGEGRIVALM 478
           DE GF+  M+ Q+ RA++A            +  L++  + +EF GY    G  +IVAL 
Sbjct: 417 DEAGFEREMEAQRVRARSA------SSFGLDYNTLVKVDVPTEFTGYKATVGAAKIVALY 470

Query: 479 DEHALAVERLAAGQKGYLVTNRTPFYGASGGQSGDIGTIASPSGKVRVVDTIKPSPELVV 538
            +   +V+ L+ G +  +V ++TPFY  SGGQ GD G ++S SG+  V DT K      +
Sbjct: 471 KD-GKSVDVLSEGDEAVVVLDQTPFYAESGGQIGDCGFLSSTSGRFEVRDTTKTGGAF-L 528

Query: 539 HHVEAVEGDILLDQEVDLTVTEDDRVASARNHTCTHLLHAALRRVLGDHVKQAGSLVAPD 598
           HH   V G++ +   VD  V  D R A+A NH+ THLLHAALR+VLG+HV+Q GSLV   
Sbjct: 529 HHGVLVLGNLTVGAPVDTQVDADVRHATALNHSATHLLHAALRQVLGEHVQQKGSLVDSQ 588

Query: 599 RLRFDFTHIAPMTPEELAAVEREVNRVIMADIPLETDHMHYDDAVKRGAMALFGEKYGDE 658
           RLRFDF+H   + PE++ A+E  VN  I  +  +ET+    + A  +GAMALFGEKYGD 
Sbjct: 589 RLRFDFSHFEAIKPEQIKALEDVVNAEIRRNTAVETEETDIETAKAKGAMALFGEKYGDN 648

Query: 659 VRVVAI-ADESVELCGGTHLRATGQAGLFLIVSESGVAAGVRRIEALTGWNAMHAVLAQR 717
           VRV+++  D SVELCGG H   TG   L  I+SE GVA+GVRRIEA+TG  A+  + A  
Sbjct: 649 VRVLSMGGDFSVELCGGIHANRTGDIALLKIISEGGVASGVRRIEAVTGAAALAYLNAAE 708

Query: 718 SEQAQLSAMLKARPGEIVSRVESLQKENRTLRKDMERAAAQATSGQGRNIMDEATDVAGV 777
            +  + ++++K     ++ ++ ++ + NR L K +E+  A+A S  G ++   A DV  V
Sbjct: 709 EQLKEAASLVKGSRDNLIDKLSAVLERNRALEKQLEQLQAKAASAAGDDLSASAVDVKDV 768

Query: 778 KLLAAKVEVPNVKALRDLMDDVRSKLVSGIACLAAVDGDKVQLIIAVSKDLQTRFTAPQL 837
           K+LAA+++  + KAL  L+D +++KL   +  L +V  DKV L+  V+KDL  +  A  L
Sbjct: 769 KVLAARLDGQDGKALLALVDQLKNKLGRAVILLGSVHEDKVVLVAGVTKDLTGQLKAGDL 828

Query: 838 IKDVAAEVGGSGGGRPDMAQAGGTNPAGIDAAFA 871
           +K  AA VGG GGGRPDMAQ GG +   +DAA A
Sbjct: 829 MKQAAAAVGGKGGGRPDMAQGGGVDAGALDAALA 862