Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 456 a.a., tRNA modification GTPase trmE from Pseudomonas syringae pv. syringae B728a

 Score =  275 bits (704), Expect = 2e-78
 Identities = 177/462 (38%), Positives = 263/462 (56%), Gaps = 20/462 (4%)

Query: 5   DTIAAIATPLGQGGIGIIRISGPASLEVLRALFRPSSSRFGGFRPWTLHHGTITDGCDP- 63
           +TIAAIAT  G+GG+GIIR+SGP + +   A+   +       +P   H+G   DG    
Sbjct: 6   ETIAAIATAQGRGGVGIIRVSGPLAGKAAEAIIGRT------LKPRFAHYGPFVDGTGQV 59

Query: 64  LDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACVRHGARYAERGEFTRRAFLNG 123
           LD+ +A++ PGP +FTGEDV E+  HGG  VL  +L+ C++ G+R A  GEF+ RAFLN 
Sbjct: 60  LDEGIALYFPGPNSFTGEDVLELQGHGGPIVLDMLLQRCLQLGSRLARPGEFSERAFLND 119

Query: 124 RMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCVAVDFPEE 183
           ++DL QAEA+A++I A S +  R A   L G   +RV  L  +L +LR+ +  A+DFPEE
Sbjct: 120 KLDLAQAEAIADLIEASSAQAARNALRSLQGAFSRRVDNLTEKLISLRIYVEAAIDFPEE 179

Query: 184 EVECLAPEAFLAEIEAVRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKSSLMNALLGR 243
           E++ LA    L  ++ VR  +  +     +    +DG  VV+AG+ NAGKSSL+NAL GR
Sbjct: 180 EIDFLADGHVLNMLDDVRAELSTVLREAGQGALLRDGMTVVIAGRPNAGKSSLLNALAGR 239

Query: 244 RRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDLVAQADLV 303
             AIVT++ GTTRD + E +++ G+ + + DTAGLR+T D VE  GV+ +   + +AD +
Sbjct: 240 EAAIVTEIAGTTRDVLREHIHIDGMPLHVVDTAGLRDTQDQVEMIGVQRALKAIGEADRI 299

Query: 304 LLVTDATQGLQG------PELELLRHAGPERVLVVFNKTDLLEGRI-LPSTPEGCRSVHV 356
           LLV DAT           PE  L +   P +V ++ NK DL    I L ++ +G  ++ +
Sbjct: 300 LLVVDATAPEAADPFALWPEF-LEQRPDPSKVTLIRNKADLSGDPINLQTSVDGHVTISL 358

Query: 357 AAAS-GDGVESLVTAIRAAVLAATGAGEPEAGELAPNMRQAAALDKAATILDELAGDIRA 415
           +A S G+G+E L    R  + A  G  +      +   R   AL  A+  L+     +  
Sbjct: 359 SARSGGEGLELL----REHLKACMGYEQTSESSFSARRRHLEALRHASDSLEHGRAQLTL 414

Query: 416 HVPYDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
               +L    L  A  AL ++TG  + + +L  IF+SFCIGK
Sbjct: 415 AGAGELLAEDLRQAQQALGEITGAFSSDDLLGRIFSSFCIGK 456