Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 452 a.a., tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE from Pedobacter sp. GW460-11-11-14-LB5

 Score =  251 bits (640), Expect = 4e-71
 Identities = 159/461 (34%), Positives = 246/461 (53%), Gaps = 13/461 (2%)

Query: 1   MQHDDTIAAIATPLGQGGIGIIRISGPASLEVLRALFRPSSSRFGGFRPWTLHHGTITDG 60
           M + DTI A++TP G G IG+IR+SGP ++ +  A+F             TLH G + DG
Sbjct: 1   MNNQDTIIALSTPSGSGAIGVIRLSGPEAISLTNAVFAGKDLEKQASH--TLHFGLVKDG 58

Query: 61  CDPLDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACVRHGARYAERGEFTRRAF 120
              +D+V+A     P+++T E+V EI CHG + ++  ++   +  GAR A+ GEFT RAF
Sbjct: 59  DHIVDEVVAGLFVAPKSYTKENVVEISCHGSNYIIQQIINLLISKGARAAKPGEFTLRAF 118

Query: 121 LNGRMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCVAVDF 180
           LNG  DL+QAEAVA++IA+ S+    +A  ++ G     +  LR +L      + + +DF
Sbjct: 119 LNGAFDLSQAEAVADLIASNSKASHDVAMQQMRGGFANELKGLREQLIHFASMIELELDF 178

Query: 181 PEEEVECLAPEAFLAEIEAVRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKSSLMNAL 240
            EE+VE    E     +  +   +  L + +      ++G  +V+AG+ N GKS+L+NAL
Sbjct: 179 AEEDVEFANREQLKNLVNKINYVLQRLISSFEMGNVIKNGVPIVIAGKPNVGKSTLLNAL 238

Query: 241 LGRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDLVAQA 300
           L   RAIV+D+ GTTRD IE+ L + G+  R  DTAG+R+T DI+E  GV  + + + QA
Sbjct: 239 LNEERAIVSDIAGTTRDTIEDELTIGGIVFRFIDTAGIRDTADIIEALGVERTLEKMKQA 298

Query: 301 DLVLLVTDATQGLQGPELE---LLRHAGPERVLVVFNKTDLLEGRILPSTPEGCRSVHVA 357
            L++ + DA Q +   E +   L + A P  +LV  NK DL+      +  E    V ++
Sbjct: 299 KLIIYMADAAQSISEIEEQIRGLKQLAIPYLILV--NKADLMADAQRKAF-EALEVVFIS 355

Query: 358 AASGDGVESLVTAIRAAV-LAATGAGEPEAGELAPNMRQAAALDKAATILDELAGDIRAH 416
           A    G++ L T +   V L      E     L  N+R   AL +    L  +  ++   
Sbjct: 356 AKEKQGIDELKTTLLEQVNLHHINTSE----TLVTNIRHVEALKQTEHALQRVLANVDNP 411

Query: 417 VPYDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
           V  D   + +  A   L ++TG  T + +L+ IF  FCIGK
Sbjct: 412 VTSDFLAMDIKQALHYLGEITGTVTTDDLLENIFTKFCIGK 452