Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 450 a.a., tRNA modification GTPase TrmE from Dechlorosoma suillum PS

 Score =  251 bits (642), Expect = 3e-71
 Identities = 179/467 (38%), Positives = 250/467 (53%), Gaps = 28/467 (5%)

Query: 1   MQHDDTIAAIATPLGQGGIGIIRISG----PASLEVLRALFRPSSSRFGGFRPWTLHHGT 56
           M   D IAAIAT  G+GG+G++RISG    P + ++   L RP  +    FR        
Sbjct: 2   MPRTDPIAAIATAPGRGGVGVVRISGSGLLPLAEQLTGRLPRPRHATLADFRA------- 54

Query: 57  ITDGCDPLDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACVRHGARYAERGEFT 116
             DG   +D  L +  P P +FTGEDV E+  HGG  VL  +L  C+  GAR AE GEFT
Sbjct: 55  -ADG-SVIDSGLLLFFPNPSSFTGEDVLELQGHGGPVVLQMLLARCLDLGARLAEPGEFT 112

Query: 117 RRAFLNGRMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCV 176
           RRAFLNG++DL QAEAVA++I A ++   R A   L G   + +  L   L  LR     
Sbjct: 113 RRAFLNGKLDLAQAEAVADLIDATTQAAARSAVRSLQGEFSREIRVLTDELIELRALTEA 172

Query: 177 AVDFPEEEVECLAPEAFLAEIEAVRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKSSL 236
            +DFPEEE++ L        ++++   +  +     + R  Q+G  VVLAGQ N GKSSL
Sbjct: 173 TLDFPEEEIDFLKAANAFGRLDSLAARLEAVFDRARQGRLLQNGLHVVLAGQPNVGKSSL 232

Query: 237 MNALLGRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDL 296
           +N L G   AIVT + GTTRD +   L + G+ + + DTAGLRET D VE+ G+  +   
Sbjct: 233 LNGLAGDELAIVTPIAGTTRDVVRGNLQIEGIPLHVIDTAGLRETEDEVERLGIERTWRE 292

Query: 297 VAQADLVLLVTDATQGLQGPELELLRHAGPERV-LVVFNKTDLL----EGRILPSTPEGC 351
           + +AD+++L+ DA +G+   E  +LR   P+   + V+NK DL     E    P   EGC
Sbjct: 293 IEKADVLVLLADAREGIAHGEEAILRRLPPDLPRITVYNKIDLTDRAPERHEEPEGGEGC 352

Query: 352 RSVHVAAASGDGVESLVTAIRAAVLAATGAGEPEAGELAPNMRQAAALDKAATILDELAG 411
            ++ ++A SG G++ L    R  +L   G  E E   +A   R   AL  A   L +L+ 
Sbjct: 353 VAISLSAKSGAGLDLL----RRELLRIAGWHEAEDVFIA-RERHLRALAAAQEHL-QLS- 405

Query: 412 DIRAHVP-YDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
             R  +P  +L    L  A  AL  +TG+ T + +L  IF  FCIGK
Sbjct: 406 --RQRLPALELFAEELRLAQNALCHITGEFTADDLLGEIFGRFCIGK 450