Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 478 a.a., tRNA modification GTPase TrmE (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  590 bits (1520), Expect = e-173
 Identities = 320/478 (66%), Positives = 359/478 (75%), Gaps = 21/478 (4%)

Query: 1   MQHDDTIAAIATPLGQGGIGIIRISGPASLEVLRALFRPSSSRFGGFRPWTLHHGTITDG 60
           M+ + TIAAIATP G GG+GIIRISGP S  +L  LF P+S RF GFRPWTLH G   D 
Sbjct: 1   MRQEGTIAAIATPPGHGGVGIIRISGPDSHAILGRLFLPASPRFAGFRPWTLHRGRACDA 60

Query: 61  CD-PLDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACVRHGARYAERGEFTRRA 119
              PLDDVLAV MPGPRTFTGEDV+EIHCHGG  VLAAVLEA    GAR A RGEFTRRA
Sbjct: 61  MGAPLDDVLAVAMPGPRTFTGEDVAEIHCHGGPAVLAAVLEAACACGARLAGRGEFTRRA 120

Query: 120 FLNGRMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCVAVD 179
           FLNGRMDLTQAEAVAEMIAAP++ G+RLAQA+L GLLG RV  LRARL  LR QLCVAVD
Sbjct: 121 FLNGRMDLTQAEAVAEMIAAPAQGGLRLAQARLQGLLGTRVAELRARLLDLRAQLCVAVD 180

Query: 180 FPEEEVECLAPEAFLAEIEAVRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKSSLMNA 239
           FPE+EV+CLAPEAF+AE +AV  GV  L + + R RCWQ+GALVVLAG VNAGKSSLMNA
Sbjct: 181 FPEDEVDCLAPEAFVAECDAVAAGVRGLLSAHERGRCWQEGALVVLAGHVNAGKSSLMNA 240

Query: 240 LLGRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDLVAQ 299
           LLGRRRAIVTD+PGTTRDFIEEP+ L+GL +RL DTAGLR+TGDIVEQEGVR+SRDLVAQ
Sbjct: 241 LLGRRRAIVTDMPGTTRDFIEEPVQLAGLPVRLVDTAGLRDTGDIVEQEGVRISRDLVAQ 300

Query: 300 ADLVLLVTDATQGLQGPELELLRHAGPE------------RVLVVFNKTDLLEGRI---- 343
           ADLVLLV DA  GL   E ELLRH   +            RVLVV NKTDL         
Sbjct: 301 ADLVLLVVDAAAGLGHAERELLRHVRDQHAQVGRPGRPGGRVLVVLNKTDLAAEASAAFR 360

Query: 344 LPSTPEGCRSVHVAAASGDGVESLVTAIRAAVLAATG----AGEPEAGELAPNMRQAAAL 399
            P+  EGC  V V+A  G GV+ L  A RA VLA  G     GEPE+G+LAPN+RQA  L
Sbjct: 361 CPTEVEGCPCVAVSALRGLGVDELAAAARAMVLAGLGGDDAGGEPESGDLAPNLRQAQVL 420

Query: 400 DKAATILDELAGDIRAHVPYDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
            +A   LD L  D+RA VPYDLC VRLDGACA L ++TG++TP  +L+ IF+SFCIGK
Sbjct: 421 RRALDELDALVADVRAGVPYDLCSVRLDGACAVLSEITGETTPAEVLEHIFSSFCIGK 478