Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 429 a.a., tRNA modification GTPase TrmE (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  199 bits (507), Expect = 1e-55
 Identities = 160/464 (34%), Positives = 227/464 (48%), Gaps = 47/464 (10%)

Query: 5   DTIAAIATPLGQGGIGIIRISGPASLEVLRALFR--PSSSRFGGFRPWTLHHGTITDGCD 62
           DTI A+A+  G+ G+ ++RISG  +    R L    P + R       +L     +DG  
Sbjct: 2   DTIFALASAPGKSGVAVLRISGSRAFHAGRVLAGGLPDAQRT------SLRKLRDSDG-S 54

Query: 63  PLDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVL-EACVRHGARYAERGEFTRRAFL 121
            +D+ L +    P +FTGED  E   HG   ++AA++ E     G R A+ GEFTRRA  
Sbjct: 55  VIDEALVLAFESPNSFTGEDCVEFQTHGSPAIIAALMNELSALPGLRLAQPGEFTRRALE 114

Query: 122 NGRMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQLCVAVDFP 181
           N RMDL Q E +A++I A +    + A     G LGQ+V   R  L      L V +DF 
Sbjct: 115 NNRMDLAQVEGLADLIEAETEAQRKQALRTFSGELGQKVELWRKDLVRAMALLEVTIDFA 174

Query: 182 EEEVECLAPEAFLAEIEA----VRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKSSLM 237
           +EEV    PE    E++     V Q +   SAG       + G  V + G  N GKSSL+
Sbjct: 175 DEEV----PEDVYPEVQELLGRVSQNLAAESAGTHAAERIRHGFEVAILGAPNVGKSSLL 230

Query: 238 NALLGRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSRDLV 297
           N L GR  AI + + GTTRD +E  L+L GL + + DTAGLRET D +EQ G+  +    
Sbjct: 231 NRLAGREAAITSSIAGTTRDVVEVRLDLDGLPVTVLDTAGLRETQDEIEQIGISRAMARA 290

Query: 298 AQADL-VLLVTDA--TQGLQGPELELLRHAGPERVLVVFNKTDLLEGRILPSTPEGCRSV 354
             ADL ++L+ D     GL   + ++L  A          K+D     ILPS+ E     
Sbjct: 291 ESADLRIILIEDGRLPSGLGVADDDILVQA----------KSD-----ILPSSSE----F 331

Query: 355 HVAAASGDGVESLVTAIRAAV-LAATGAGEPEAGELAPNMRQAAALDKAATILDELAGDI 413
            +++ +G G++ LV A+   + L A  AG       A ++R   A+  A   LD     I
Sbjct: 332 AISSVTGRGIDRLVKAVSHRLSLRAASAG------TATHVRHRLAISSAVESLDLAKTKI 385

Query: 414 RAHVPYDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
               P +L    L  A   L  + G+   E +LD IFA+FC+GK
Sbjct: 386 SEGFPVELVIEDLRQALVDLESLIGRVGVEQVLDEIFANFCLGK 429