Pairwise Alignments

Query, 457 a.a., tRNA modification GTPase TrmE (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 464 a.a., tRNA modification GTPase TrmE from Burkholderia phytofirmans PsJN

 Score =  223 bits (567), Expect = 1e-62
 Identities = 165/470 (35%), Positives = 239/470 (50%), Gaps = 29/470 (6%)

Query: 5   DTIAAIATPLGQGGIGIIRIS----GPASLEVLRALF--RPSSSRFGGFRPWTLHHGTIT 58
           D I AIAT  G+GGIG++RIS    G A+ + L      +  + R   + P+    G   
Sbjct: 7   DPIVAIATAPGRGGIGVVRISFGRAGEAAAQPLMQALTGQTLAPRHASYVPFLDVSG--- 63

Query: 59  DGCDPLDDVLAVHMPGPRTFTGEDVSEIHCHGGSGVLAAVLEACV----RHGARYAERGE 114
              + LD  +A++ P P ++TGE V E+  HGG  VL  VL+ C+      G R AE GE
Sbjct: 64  ---NALDRGIALYFPAPHSYTGEHVLELQGHGGPVVLQLVLQRCIDAGRAFGLRLAEPGE 120

Query: 115 FTRRAFLNGRMDLTQAEAVAEMIAAPSREGMRLAQAKLDGLLGQRVGALRARLDALRMQL 174
           FTRRAFLN ++DL QAEAVA++I A +    R A   LDG   + + AL   +  LRM +
Sbjct: 121 FTRRAFLNDKLDLAQAEAVADLIEASTEAAARSAGRSLDGAFSRDIHALVEDVITLRMLV 180

Query: 175 CVAVDFPEEEVECLAPEAFLAEIEAVRQGVVELSAGYARTRCWQDGALVVLAGQVNAGKS 234
              +DFPEEE++ L       ++  +R+ +  + +   +    ++G  VVLAGQ N GKS
Sbjct: 181 EATLDFPEEEIDFLEAADARGKLTRIRERLAHVLSEARQGALLREGLSVVLAGQPNVGKS 240

Query: 235 SLMNALLGRRRAIVTDLPGTTRDFIEEPLNLSGLAIRLADTAGLRETGDIVEQEGVRMSR 294
           SL+NAL G   AIVT + GTTRD + + + + G+ + + DTAGLR+T D VE+ G+  + 
Sbjct: 241 SLLNALAGAELAIVTPIAGTTRDKVAQTIQIEGIPLHVIDTAGLRDTEDEVEKIGIARTW 300

Query: 295 DLVAQADLVLLVTDATQGLQGPELELL-RHAGPERVLVVFNKTDLLEGRILPSTPE---- 349
             + +AD+VL + DA  G+   +  +  R      V+ V NKTDL    + P+T      
Sbjct: 301 SEIERADVVLHLLDARTGMTAEDDAIAGRFPRGVPVVRVLNKTDLT--GLAPATQALDAD 358

Query: 350 -GCRSVHVAAASGDGVESLVTAIRAAVLAATGAGEPEAGELAPNMRQAAALDKAATILDE 408
                V ++A  GDG    V  +R  +L   G             R   AL  A   L  
Sbjct: 359 LELSEVRLSAKQGDG----VALLRDELLRIAGWQAGAESVYLARERHLIALRAAEEHLAT 414

Query: 409 LAGDI-RAHVPYDLCGVRLDGACAALMDVTGQSTPEAILDAIFASFCIGK 457
            A    +     DL    L  A   L  +TG+ + + +L  IF+ FCIGK
Sbjct: 415 AAAHADQNSQALDLFAEELRLAQDQLNSITGEFSSDDLLGVIFSRFCIGK 464