Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 556 a.a., Preprotein translocase subunit YidC from Pseudomonas stutzeri RCH2

 Score =  291 bits (744), Expect = 6e-83
 Identities = 186/523 (35%), Positives = 277/523 (52%), Gaps = 41/523 (7%)

Query: 31  PKSVPATEQKTAASAPAPSVVTSAPEAVTPAPAFSPSTGHEVTVTTPLYKAVLHSGGGVL 90
           P S  AT +  A   PA     +  +  +  PA +PS+   + V T +    +   GG +
Sbjct: 47  PDSPSATSEGNADDVPA----VAGQQQASALPATAPSS-QLIRVRTDVLDVAIDPRGGDI 101

Query: 91  RQFMLSRYHMGIDRDAAPVNLIESSAIRV--APLGLLVNGQPSWNTG--QWAFEGGDLNL 146
            +  L ++    DR   P  L E S  R   A  GL+ +G P   +G  Q++ E  +  L
Sbjct: 102 VELHLPQFPRRQDRPDVPFQLFERSGERTYEAQSGLIGDG-PDQASGRPQYSSEKTEYQL 160

Query: 147 ADGQTGTLRFVG-SVDGLRVVRELEFHADSYLVTEKLHLAPEGDAPRTARVGFTLG---- 201
           A+GQ   +  +  S DG+  ++       +Y +     +  + + P T   G+  G    
Sbjct: 161 AEGQDQLVVDLNYSADGVNYIKRFTLERGNYALKVNYLIDNQSEQPWT---GYLFGQLKR 217

Query: 202 ------TTSLTPGESQYNLTRVAWFADGSFSEKSSTGDLEKGVL---IDGSIDWAGVMSN 252
                 ++S   G + Y L    W  D  +  K S GD++   L   + G   W   + +
Sbjct: 218 DKSGDPSSSTATGTATY-LGAALWTKDEPY-RKVSMGDMDDKNLRETVQGG--WIAWLQH 273

Query: 253 YFLAAVAPK--DTRAVLKGKLEGGVYRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLN 310
           YF+ A  P+  DT  V   K   G Y +    P   V  G         + GPK +D L 
Sbjct: 274 YFVTAWIPQAEDTNQVQTRKDSQGNYIIGFTGPAVTVAAGAQGETGATLYAGPKSQDKLE 333

Query: 311 AAPNNLGKAIDLGWFGFIARPLVTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYK 370
                L   +D G   FIA+P+  LL+  +  +GN+G +II+LTI+IKL F+PLS  SY+
Sbjct: 334 ELSPGLRLTVDYGILWFIAQPIFWLLENIHALLGNWGWSIIVLTIIIKLAFFPLSAASYR 393

Query: 371 SMEQMKKLQPMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQ 430
           SM +M+ + P +  ++E+  DDR+KM++ MM LYK  K+NP GGCLP+LVQ+PVF  LY 
Sbjct: 394 SMARMRAVSPKMQALKEQFGDDRQKMSQAMMELYKKEKINPLGGCLPILVQMPVFLALYW 453

Query: 431 ALLNAIELRHAPFIAHVPFTDIVWLADLSAKDPFYVTPLVMGATMFLQQKLTPPAGDPTQ 490
            LL ++E+R AP+        + W+ DLS KDPF++ P++MG TMF+QQ+L P   DP Q
Sbjct: 454 VLLESVEMRQAPW--------MFWITDLSIKDPFFILPIIMGVTMFIQQQLNPTPPDPMQ 505

Query: 491 AKVMMFMPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQWWILRK 533
           A+VM  +P++FTF FL FP+GLV+YW+ NNVLSIAQQW+I R+
Sbjct: 506 ARVMKLLPIIFTFFFLWFPAGLVLYWVVNNVLSIAQQWYITRQ 548