Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 541 a.a., membrane protein insertase YidC from Vibrio cholerae E7946 ATCC 55056

 Score =  273 bits (698), Expect = 1e-77
 Identities = 180/557 (32%), Positives = 292/557 (52%), Gaps = 51/557 (9%)

Query: 1   MENKRAIIAVVL---SFIVLVGWGYLSEYMGWTPKSVPATEQKTAASAPAPSVVTSAPEA 57
           M+++R I+ + L   SF++   W      +   P      + ++  +APAPS      + 
Sbjct: 1   MDSQRNILLIALALVSFLLFQQW-----QVAKNPAPQATQQAQSTGAAPAPSF----SDE 51

Query: 58  VTPAPAFSPST-GHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSA 116
           + P PA + +     +TV+T +    + + GG +    L++Y   ++   + V L  +  
Sbjct: 52  LDPTPAQNVAAKAKTITVSTDVLTLSIDTLGGDVVSAKLNQYSEELNSPESFVLLQNTQG 111

Query: 117 IR-------VAPLGLLV--NGQPSWNTGQWAFEGGDLNLADGQTGT-LRFVGSVDGLRVV 166
            +       V P G+ V  N +P++     +F      LA+GQ    +      +G+   
Sbjct: 112 HQFIAQSGLVGPQGIDVTSNNRPAYQVSADSF-----TLAEGQDELRIPMTYQANGIDYT 166

Query: 167 RELEFHADSYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPGESQYNLTRVAWFADGSFS 226
           +       SY V     +A    +  T  +   L    L  G +    T    +  G++S
Sbjct: 167 KTFILKRGSYAVDVVFDVANNSGSEATLGMYAHLRQNLLDSGGNLAMPT----YRGGAYS 222

Query: 227 ------EKSSTGDLEKGVLI---DGSIDWAGVMSNYFLAAVAPKDT-RAVLKGKLEGGVY 276
                 +K S  D++   L    D +++W  ++ +YF +A  P+D  +A L  ++   + 
Sbjct: 223 TSDVRYKKYSFDDMKDRNLSAPNDVTVNWVAMIQHYFASAWIPRDEPQAQLYSRVINNLG 282

Query: 277 RVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLGKAIDLGWFGFIARPLVTLL 336
            + +  P++ +  G+        W GPK +D + A   NL   +D GW  FIA+PL  LL
Sbjct: 283 DMGIRTPNKTIANGDKAEFEATLWVGPKLQDQMAATAPNLDLVVDYGWLWFIAKPLHWLL 342

Query: 337 DFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREKM 396
                +VGN+G AII LT +++   +PL+   Y SM +M+ LQP L  +RE+  DDR++M
Sbjct: 343 SVIQTFVGNWGVAIICLTFIVRGAMYPLTKAQYTSMAKMRMLQPKLQAMRERIGDDRQRM 402

Query: 397 NEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDIVWLA 456
           ++EMM LYK  KVNP GGCLP+L+Q+P+F  LY AL+ ++ELRH+PF          W+ 
Sbjct: 403 SQEMMELYKKEKVNPLGGCLPILLQMPIFIALYWALMESVELRHSPFFG--------WIH 454

Query: 457 DLSAKDPFYVTPLVMGATMFLQQKLTPPA-GDPTQAKVMMFMPVVFTFLFLNFPSGLVVY 515
           DLSA+DP+Y+ PL+MGA+MF+ QK++P    DP Q K+M FMPV+FTF FL FPSGLV+Y
Sbjct: 455 DLSAQDPYYILPLLMGASMFVIQKMSPTTITDPMQQKIMTFMPVMFTFFFLWFPSGLVLY 514

Query: 516 WLCNNVLSIAQQWWILR 532
           WL +N++++ QQ  I +
Sbjct: 515 WLVSNIVTLIQQTLIYK 531