Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 595 a.a., inner membrane protein translocase component YidC from Sinorhizobium meliloti 1021

 Score =  243 bits (619), Expect = 2e-68
 Identities = 172/586 (29%), Positives = 259/586 (44%), Gaps = 68/586 (11%)

Query: 1   MENKRA-IIAVVLSFIVLVGWGYLSEYMGWTPKSVPATE-QKTAASAPAPSVVTSAPEAV 58
           MEN R   +A+ LS ++L+ W +           + A + Q+   +   P    +AP   
Sbjct: 2   MENNRNYFVAIALSVLILIAWQFFYVSPKMEKDRIAAEQAQQAQQTQQQPGAQPAAPGQA 61

Query: 59  TPAPAFSPSTGHE----------VTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDA-- 106
            P  A  PS G            V + TP     ++  G       L  Y   +D  +  
Sbjct: 62  LPGGAI-PSAGESRDQAIGKSARVAIDTPALSGSINLTGARFDDLKLKGYRETVDPKSPV 120

Query: 107 ----APVNLIESSAIRVAPLGLLVNGQPSWNTGQWAFEGGDLNLADGQTGTLRFVGSVDG 162
               +P    +     +  +G    G        W   GGD  L      TL +     G
Sbjct: 121 ITLFSPAETADGYFTEIGYIGSDATGSVPGPQTTWTLSGGD-KLTPSTPVTLSYTND-KG 178

Query: 163 LRVVRELEFHADSYLVTEKLHLAPEGDAP-------RTARVGFTLGTTSLTPGESQYNLT 215
           +   R +    D Y+      +  E  AP       R  R       +     E    + 
Sbjct: 179 ITFARTISVD-DRYMFQVVDSIKNETAAPVSLSSYGRVTRFNKPTTPSIYVLHEGFVGVA 237

Query: 216 RVAWFADGSFSEKSSTGDLEKGVLIDGSIDWAGVMSNYFLAAVAPKDTRA--VLKGKLEG 273
                 +  +S+      +E G    G   W G+   Y+ A + P       +       
Sbjct: 238 GEHGLQEVGYSKVEDDEPVEPGKSTGG---WLGITDKYWAATIVPPQATPFDIRFSHFAD 294

Query: 274 GVYRVAVERPDQMVN--PGNSDVIVCNYWFGPKERDLLNA-----APNNLGKAIDLGWFG 326
           G  R   +     V   PG S  +    + G KE  +++      +  N  K ID GWF 
Sbjct: 295 GRPRYQSDYKSDAVTVAPGQSVELKNLVFAGAKEVPVVDNYEVAYSIPNFDKLIDWGWFY 354

Query: 327 FIARPLVTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVR 386
           FI +P+  ++DFF++  GN+G AI++ TI++KL+F+PL++K Y SM  MKK+QP + +++
Sbjct: 355 FITKPMFKMMDFFFRLFGNFGIAILITTIVVKLIFFPLANKQYASMANMKKVQPKMEELK 414

Query: 387 EKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAH 446
           +K  DDR  + + MM+LYK  K+NP  GC P+L+QIPVFF LY+ +   IE+RHAPF   
Sbjct: 415 KKFGDDRMGLQQAMMQLYKEEKINPLAGCWPILIQIPVFFALYKVIYVTIEMRHAPFFG- 473

Query: 447 VPFTDIVWLADLSAKDP-------------------FYVTPLVMGATMFLQQKLTPPAGD 487
                  W+ DLSA DP                     + P++MG TMFLQ ++ P   D
Sbjct: 474 -------WIQDLSAPDPTTIINLFGLLPFEGPAFLHLGIWPIIMGVTMFLQMRMNPTPPD 526

Query: 488 PTQAKVMMFMPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQWWILRK 533
           PTQA +  +MPVVFTF+  +FP+GLV+YW  NN LSI QQ  I+++
Sbjct: 527 PTQAMLFTWMPVVFTFMLASFPAGLVIYWAWNNTLSILQQGIIMKR 572