Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 595 a.a., 60 kDa inner membrane insertion protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  251 bits (640), Expect = 7e-71
 Identities = 184/617 (29%), Positives = 279/617 (45%), Gaps = 112/617 (18%)

Query: 1   MENKRAIIAVVLSFIVLVGWGYLS-------------------------------EYMGW 29
           ++ +  I+A+VLS  VL G+ Y                                 +  G 
Sbjct: 2   LQQRNLILAIVLSMAVLFGFEYFFGAKQPPMTAQQQDSAQMAAPSNGQMAAPSSVQAPGQ 61

Query: 30  TPKSVPATEQKTAASAPAPSVVTSAPEAVTPAPAFSPSTGHEVTVTTPLYKAVLHSGGGV 89
           +P + P    +  A+ P P  +T    +++   A +      + + T      +   G  
Sbjct: 62  SPVAAPQVPAQPGAAVPTPGGMTPGAASLSREEALAADISPRIGIDTARLHGSIRLRGAR 121

Query: 90  LRQFMLSRYHMGIDRDAAPVNLIESSAIRVAPLGLL-----VNGQPSWNTGQ----WAFE 140
           +    L  Y   +D  +  ++L+       APL        V G P          W  +
Sbjct: 122 IDDLSLVDYRETVDPQSPEISLLSPPG---APLPYYAEFGWVAGTPGVKVPDADTLWQAD 178

Query: 141 GGDLNLADGQTGTLRFVGSVDGLRVVRELEFHAD-SYLVTEKLHLAPEGDAPRTARVGFT 199
            G L +    T T     + +GLR +R++    D  + +T+ +     G     A   F 
Sbjct: 179 RGALGVDAPVTLTW---DNGEGLRFIRKIAIDHDFMFSITQAVENTGAG-----AVTLFP 230

Query: 200 LGTTSL--TPGESQYNLTRVAWFA--DGSFSEKSSTGDLEKGVLIDGSID-WAGVMSNYF 254
            G  S   TP    Y +         DG+  E   +   + G +   S   W G+   Y+
Sbjct: 231 YGLVSRINTPALLNYYILHEGPLGVFDGTLKEVKYSALKDDGEVKHTSTGGWMGITDKYW 290

Query: 255 LAAVA--------------PKDTRAVLKGKLEGGVYRVAVERPDQMVNPGNSDVIVCNYW 300
           L A+               P+D R   +    G  + V          PG       + +
Sbjct: 291 LTALVTDQSMPVTGRFLYQPRDGRDGYQADFLGAAFTV---------EPGGRIETSNHLF 341

Query: 301 FGPKERDLLNAAPNNLG-----KAIDLGWFGFIARPLVTLLDFFYKYVGNYGTAIILLTI 355
            G KE  LL+   + LG      AID GWF F+ +P    + F +  +GN G AI+  T+
Sbjct: 342 SGAKEVKLLDRYTDELGIKNFDLAIDFGWFYFMTKPFFLSIQFLHGILGNMGLAILAFTV 401

Query: 356 LIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGC 415
           ++KLVF+PL++KSY+SM +MK LQP L K++E+  DDR ++N+EMM LYK  +VNP  GC
Sbjct: 402 VLKLVFFPLANKSYRSMSKMKLLQPELKKLQERFKDDRARLNQEMMSLYKKEQVNPLSGC 461

Query: 416 LPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDIVWLADLSAKDPFYV--------- 466
           LP+++QIPVFF LY+ L  +IE+RH PF          W+ DL+A DP  V         
Sbjct: 462 LPIVIQIPVFFALYKVLFVSIEMRHEPFYG--------WIRDLAAPDPTTVFNLFGLIPW 513

Query: 467 ----------TPLVMGATMFLQQKLTPPAGDPTQAKVMMFMPVVFTFLFLNFPSGLVVYW 516
                      PL+MG TM++QQKL P   DPTQAK+MMF+P++FTF+  +F +GLV+YW
Sbjct: 514 DPPNMLMLGAWPLIMGVTMWMQQKLNPTPADPTQAKIMMFLPIMFTFMLAHFAAGLVIYW 573

Query: 517 LCNNVLSIAQQWWILRK 533
             NN+LSI QQW I+++
Sbjct: 574 TWNNLLSITQQWVIMKR 590