Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 622 a.a., membrane protein insertase YidC from Rhodopseudomonas palustris CGA009

 Score =  272 bits (695), Expect = 3e-77
 Identities = 201/614 (32%), Positives = 283/614 (46%), Gaps = 98/614 (15%)

Query: 2   ENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQKTAAS---------APAPSVVT 52
           +N+  I+AVVLS +VL+GW Y         +      Q+ AA          A +P+   
Sbjct: 3   DNRNTILAVVLSGLVLLGWQYFFNIPQMEKQRAAQQAQQQAAKQQAETQTPGAASPAAAP 62

Query: 53  SAPEAVTPAPAFSP---------------STGHEVTVTTPLYKAVLHSGGGVLRQFMLSR 97
           +AP A   APA SP               + G  + V TP     +   G  +    L +
Sbjct: 63  AAPGAPGSAPA-SPQQPAAAPTVSREAALAAGPRIKVETPRLSGSIALKGARIDDLALMQ 121

Query: 98  YHMGIDRDAAPVNLIESSAIR---------VAPLGLLVNGQPSWNTGQWAFEGGDLNLAD 148
           Y   +D  + P+ L   S            V   G  V   P  NT  W  EG    L  
Sbjct: 122 YRETVDPKSPPIELFSPSGSARPYYAEFGWVGAAGASVK-LPDHNT-LWEQEGTGA-LTP 178

Query: 149 GQTGTLRFVGSVDGLRVVRELEFHADSYLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPG 208
               TL++    +GL   R++    D YL T K  +   G AP T    F L +   TP 
Sbjct: 179 ANPVTLKWDNG-EGLTFRRQITVD-DRYLFTVKDDVTNTGGAPVTL-YPFALISRHGTPH 235

Query: 209 ESQYNLTR---VAWFADGSFSEKS-STGDLEKGVLIDGSIDWAGVMSNYFLAAVAPKDTR 264
              Y +     + +  D    E S S  D  K V    +  W G+   Y+ +A+ P DT 
Sbjct: 236 VEGYYILHEGLIGYLGDQGLQEYSYSKIDEAKSVGFKATNGWLGITDKYWASALLP-DTS 294

Query: 265 AVLKGKLEGG------VYRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNA------- 311
           A L+ +           Y+       + V  G +       + G KE  ++         
Sbjct: 295 AQLQARFSANKVGNVTTYQTDYLEDARTVPIGGTVTANARLFAGAKEARVVGINFPFAGL 354

Query: 312 -------APNNLGKAIDLGWFGFIARPLVTLLDFFYKYVGNYGTAIILLTILIKLVFWPL 364
                    N+    ID GWF FI +P+   LDFF+  VGN+G AI+L+T+L+KL+F PL
Sbjct: 355 GGYDRQLGLNHFDLLIDWGWFYFITKPMFLALDFFFHLVGNFGVAILLVTVLVKLLFLPL 414

Query: 365 SHKSYKSMEQMKKLQPMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGGCLPMLVQIPV 424
           ++KSY SM +MK +QP LA ++E+H DD+ K  +EMM +Y+  K+NP  GCLP+L+QIPV
Sbjct: 415 ANKSYASMAKMKAIQPQLAALKERHPDDKVKQQQEMMEIYRKEKINPVAGCLPILLQIPV 474

Query: 425 FFGLYQALLNAIELRHAPFIAHVPFTDIVWLADLSAKDPFYV------------------ 466
           FF LY+ L   IE+RHAPF          W+ DLSA DP  +                  
Sbjct: 475 FFSLYKVLFVTIEMRHAPFFG--------WIHDLSAPDPTNIFNLFGLIPYDPTAIPVLG 526

Query: 467 -------TPLVMGATMFLQQKLTPPAGDPTQAKVMMFMPVVFTFLFLNFPSGLVVYWLCN 519
                   PLVMG TM+ Q KL P   DPTQ  +  +MPV+FTF+  +FP+GLV+YW  N
Sbjct: 527 HYLVLGAWPLVMGFTMWFQMKLNPQPPDPTQQMIFAWMPVIFTFMLAHFPAGLVIYWAWN 586

Query: 520 NVLSIAQQWWILRK 533
           N LS+AQQ +I+++
Sbjct: 587 NTLSVAQQAFIMQR 600