Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 597 a.a., membrane protein insertase YidC from Pedobacter sp. GW460-11-11-14-LB5

 Score =  123 bits (309), Expect = 2e-32
 Identities = 97/340 (28%), Positives = 165/340 (48%), Gaps = 44/340 (12%)

Query: 220 FADGSFSEKSSTGDLEKGVLIDGSIDWAGVMSNYFLAAVAPKDTRAVLKGKLEGGV---- 275
           + DG     S + D EK  L  G I W     ++F A++  K  +A  KG LE  +    
Sbjct: 227 YLDGDVDHLSVSKD-EKEDLSKGKIQWFSFKQHFFSASLISK--QAFEKGSLEVKIPTAP 283

Query: 276 -----YRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLGKAIDLGWFG--FI 328
                Y   ++ P    +  N  V    ++FG  +   L A   +L + +D+G++   +I
Sbjct: 284 GLVKFYDANMQLP--YAHTANQ-VYEMEFYFGTNKFSALKAQGYDLEQQVDMGYWPLKYI 340

Query: 329 ARPLVT-LLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVRE 387
            R +V  + +F   +  NYG  I++LTIL+K+   PL++KSY SM +M+ L+P + +++ 
Sbjct: 341 NRFIVLPVFNFLNSFGWNYGLIILVLTILLKVALSPLTYKSYLSMAKMRVLKPEMDEIKA 400

Query: 388 KHADDREKM-NEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAH 446
           K  +D   +  +E ++LYK   VNP GGCLPM++Q+P+    +    N  ELR   F+  
Sbjct: 401 KVGEDNPTLVQQEYLKLYKKAGVNPLGGCLPMVLQLPLVMAFFFFFPNLFELRGESFL-- 458

Query: 447 VPFTDIVWLADLSAKDPF---------------YVTPLVMGATMFLQQKLTPPAGDPTQA 491
                  W+ DLS  D F                +  L+  +T+ +       +G   Q 
Sbjct: 459 -------WMKDLSTYDEFIKFGVKIPFIGDHLSLMCVLMTISTLIMTYFNNQVSGATGQM 511

Query: 492 KVMMF-MPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQWWI 530
           K + + MPV+F  +  ++P+GL  Y+   N+++  QQ+ I
Sbjct: 512 KYIGYIMPVIFLGVLNSYPAGLNYYYFLANLMTFGQQFLI 551