Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 542 a.a., 60 kDa inner membrane insertion protein (RefSeq) from Shewanella loihica PV-4

 Score =  263 bits (672), Expect = 1e-74
 Identities = 176/557 (31%), Positives = 276/557 (49%), Gaps = 58/557 (10%)

Query: 1   MENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVP---ATEQKTAASAPAPSVVTSAPEA 57
           ME++R I+ + L F+  + W        W     P   ATE    AS    +     P+A
Sbjct: 1   MESQRNILLIGLLFVSFLLW------QQWQTDKNPQPVATESSVVASTVTDAHSADVPDA 54

Query: 58  VTPAPAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSAI 117
               P    ++   ++VTT      ++  GG +    L  + +  D++   V L ++  I
Sbjct: 55  DAALPEAVAASKELISVTTDQLTLKINPVGGDIVYSALVGHKLEQDKEEPFVLLQQTKDI 114

Query: 118 R-VAPLGLLV-NGQPSWNTGQWAFEGGD--LNLADGQTGT---LRFVGSVDGLRVVRELE 170
             ++  GL+  NG  S   G+  F        LADGQ      L +V   +G+   +   
Sbjct: 115 YYISQSGLIGRNGIDSSTKGRAHFSSQSQAYTLADGQDTLEIPLTYVAD-NGVTYTKVFT 173

Query: 171 FHADSYLV----------TEKLHLAPEGDAPRTARVGF------TLGTTSLTPGESQYNL 214
            H   + V           E+L +   G    + +         T    + +  +++Y  
Sbjct: 174 LHRGKFDVGVEYRINNTSAEQLQVQMYGQIKHSIKKSESSMMMPTYRGAAFSTADTRYEK 233

Query: 215 TRVAWFADGSFSEKSSTGDLEKGVLIDGSIDWAGVMSNYFLAAVAP--KDTRAVLKGKLE 272
                 AD +  +K+  G             WA ++ +YF++A  P   D   +      
Sbjct: 234 YSFEDMADKNLDKKTLGG-------------WAAMLQHYFVSAWVPPANDQNTIFSSVSA 280

Query: 273 GGVYRVAVERPDQMVNPGNSDVIVCNYWFGPKERDLLNAAPNNLGKAIDLGWFGFIARPL 332
           GG+  +        V PG    I   ++ GPK+++ L+A   +L   +D G+  ++A P+
Sbjct: 281 GGLANIGFRGAVYDVAPGTQQTISAQFYVGPKDQEALSAISESLNLVVDYGFLWWLAIPI 340

Query: 333 VTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADD 392
             LL F+  +VGN+G AIIL+T+ ++ + +PL+   Y SM +M+ LQP L  ++E+  DD
Sbjct: 341 HWLLMFYQSFVGNWGVAIILITLTVRGMLYPLTKAQYTSMAKMRNLQPKLQDMKERFGDD 400

Query: 393 REKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDI 452
           R+KM + MM LYK  KVNP GGCLP+L+Q+P+F  LY  LL + ELRHAPF        +
Sbjct: 401 RQKMGQAMMELYKKEKVNPMGGCLPILLQMPIFIALYWVLLESYELRHAPF--------M 452

Query: 453 VWLADLSAKDPFYVTPLVMGATMFLQQKLTP--PAGDPTQAKVMMFMPVVFTFLFLNFPS 510
           +W+ DLS +DP+YV PL+MG +MFL QK+ P  P  DP Q K+M +MPV+FT  FL FP+
Sbjct: 453 LWITDLSVQDPYYVLPLLMGVSMFLMQKMQPMAPTMDPMQQKMMQWMPVIFTVFFLWFPA 512

Query: 511 GLVVYWLCNNVLSIAQQ 527
           GLV+YWL  N+++I QQ
Sbjct: 513 GLVLYWLVGNLVAITQQ 529