Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 539 a.a., 60 kDa inner membrane insertion protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  776 bits (2003), Expect = 0.0
 Identities = 375/540 (69%), Positives = 439/540 (81%), Gaps = 7/540 (1%)

Query: 1   MENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQKTAASAPAPSVVTSAPEAVTP 60
           ME+KRAIIA+ LSF+VLVGW YL+++MGW  +  P  +Q+  A + + +   SA +A  P
Sbjct: 1   MESKRAIIAIALSFVVLVGWSYLADHMGWNGQPAPQAQQEETAPSASQAAPQSASQAAAP 60

Query: 61  AP-----AFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESS 115
           AP      F PS G EVTV TPLYKAVLHSGGGVL+ F L+RY   I   A  V++++++
Sbjct: 61  APRAETPVFLPSAGREVTVVTPLYKAVLHSGGGVLKHFSLTRYRTAITAGAPAVDMVDTA 120

Query: 116 AIRVAPLGLLVNGQPSWNTGQWAFEGGDLNLADGQTGTLRFVGSVDGLRVVRELEFHADS 175
           +  ++PLGLL+NGQPSWNTGQW+F+GGDL+L  GQ+G L F G VDG+RVVREL F AD+
Sbjct: 121 STVMSPLGLLINGQPSWNTGQWSFDGGDLSLGAGQSGVLTFTGEVDGVRVVRELTFSADT 180

Query: 176 YLVTEKLHLAPEGDAPRTARVGFTLGTTSLTPGESQYNLTRVAWFADGSFSEKSSTGDLE 235
           YL++EK+ LAP  DA RT R+GFT+GT +L+P   QY+ TRVAW  DGSFSEK+S  DLE
Sbjct: 181 YLISEKVRLAPLADA-RTVRLGFTVGTGNLSPNGGQYDHTRVAWLHDGSFSEKTSASDLE 239

Query: 236 KGVLIDGSIDWAGVMSNYFLAAVAPKDTRAV-LKGKLEGGVYRVAVERPDQMVNPGNSDV 294
           KGVL  G++ W  VMSNYFL A AP DT  V LKGKL+ GVYRVA+ER D  +  G    
Sbjct: 240 KGVLETGALSWGAVMSNYFLVAAAPVDTTGVTLKGKLQEGVYRVAMERGDVSIPAGGETT 299

Query: 295 IVCNYWFGPKERDLLNAAPNNLGKAIDLGWFGFIARPLVTLLDFFYKYVGNYGTAIILLT 354
           + CNYWFGPK+R LL  APN L +AI+LGWF  IARPLV +L+FF+KYVGNYG AIILLT
Sbjct: 300 VACNYWFGPKDRGLLKEAPNQLAEAINLGWFSIIARPLVDMLEFFHKYVGNYGVAIILLT 359

Query: 355 ILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADDREKMNEEMMRLYKTYKVNPAGG 414
           ++IKLVFWPLSHKSYKSMEQMKKLQPML K+REKH DDREKMNEEMMRLYKTYKVNPAGG
Sbjct: 360 VVIKLVFWPLSHKSYKSMEQMKKLQPMLQKLREKHGDDREKMNEEMMRLYKTYKVNPAGG 419

Query: 415 CLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDIVWLADLSAKDPFYVTPLVMGAT 474
           CLPMLVQIPVFFGLYQALLNAIELRHA FI H+PFTD+VWLADLSAKDP+Y+TP+VMGAT
Sbjct: 420 CLPMLVQIPVFFGLYQALLNAIELRHASFITHLPFTDMVWLADLSAKDPYYITPIVMGAT 479

Query: 475 MFLQQKLTPPAGDPTQAKVMMFMPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQWWILRKA 534
           M LQQKLTP  GDPTQAK+MMFMPVVFTF+FL+FPSGLVVYWLCNNVLSIAQQWW+LRKA
Sbjct: 480 MLLQQKLTPAPGDPTQAKIMMFMPVVFTFMFLSFPSGLVVYWLCNNVLSIAQQWWMLRKA 539