Pairwise Alignments

Query, 534 a.a., inner membrane protein, 60 kDa (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 586 a.a., membrane protein insertase, YidC/Oxa1 family, N-terminal domain from Sphingomonas koreensis DSMZ 15582

 Score =  219 bits (559), Expect = 2e-61
 Identities = 163/574 (28%), Positives = 268/574 (46%), Gaps = 73/574 (12%)

Query: 2   ENKRAIIAVVLSFIVLVGWGYLSEYMGWTPKSVPATEQK----TAASAPAPSVVTSAPEA 57
           + K  ++  VL+ ++L GW   ++++ +   + P TE K       + P       +P A
Sbjct: 4   DQKNFLLFAVLAALLLFGWPMATQWL-FPTANPPVTEVKGGKTEVVANPGADPAADSPAA 62

Query: 58  VTPAPAFSPSTGHEVTVTTPLYKAVLHSGGGVLRQFMLSRYHMGIDRDAAPVNLIESSAI 117
           +         T   V + TP  +  ++  G  +   +L ++   I +D+ P+ L+  S  
Sbjct: 63  IRDRKLVLAETPR-VQIETPTVRGSINLKGARIDDLVLVKHKETIAKDSDPIRLLSPSGT 121

Query: 118 RVAPLGLLVNGQPSWN-TGQWAFEGGDLNLADGQ----TGTLRFVGSVDGLRVVRELEFH 172
           + A           W+ TG  A     +  A G     T  ++   S    R + EL   
Sbjct: 122 QDAYFAGF-----GWSGTGLTAPAADAVWTASGDKLTPTTPVKLTSSNGTQRFIIELSVD 176

Query: 173 ADSYLVTEKLHLAPEGDAP-RTARVGFTLGTTSLTPGESQYNLTRVAWFADGSFSEKSST 231
            + Y+ T +  +A  GD P   A  G+        PG+     T  A          S  
Sbjct: 177 -EGYMFTVRQRVANLGDKPISVAGYGYLY---RYGPGKDHDTWTIHAG------PVASYN 226

Query: 232 GDLEKGVLIDGSID-----------WAGVMSNYFLAAVAP-KDTRAVLKGKLEGGVYRVA 279
           G ++ GV  D   D           W G    Y+L A+ P +  +  LK +  GG    A
Sbjct: 227 GVVDYGVNYDTVKDEGPKSFDSTGGWVGYTDIYWLTALVPDQGMKTALKFRPAGGTATQA 286

Query: 280 VERPD--QMVNPGNSDVIVCNYWFGPKERDLLN-----AAPNNLGKAIDLGWFGFIARPL 332
              P   + V PG        ++ G K+ +LL+        +  GKAID GWF    +P+
Sbjct: 287 QFEPATARQVGPGQMVTQTSRFFAGAKDINLLDDYEEKGGIHQFGKAIDWGWFEIFEKPI 346

Query: 333 VTLLDFFYKYVGNYGTAIILLTILIKLVFWPLSHKSYKSMEQMKKLQPMLAKVREKHADD 392
              L++ ++ +GN+G AII LT+ ++L+ +P++ K + SM QM+ +QP +  ++E++ DD
Sbjct: 347 FHYLNWLFRMIGNFGVAIIALTLTVRLLLFPIAQKQFASMAQMRAVQPKMKAIQERYKDD 406

Query: 393 REKMNEEMMRLYKTYKVNPAGGCLPMLVQIPVFFGLYQALLNAIELRHAPFIAHVPFTDI 452
           +++  +E+M+LYK  KVNP  GCLP L+QIP+ + LY+ L+ +IE+RH PF        I
Sbjct: 407 KQRQQQEIMKLYKDEKVNPLAGCLPTLLQIPILYALYKVLMLSIEMRHQPF--------I 458

Query: 453 VWLADLSAKDPFY-------------------VTPLVMGATMFLQQKLTPPAGDPTQAKV 493
           +W+ DLSA DP +                   V P+++G +M+ Q KL P   D  Q +V
Sbjct: 459 LWIKDLSAPDPLHILNLFGLLDFNPPAFLAIGVLPILLGLSMWAQFKLNPAPMDDVQKQV 518

Query: 494 MMFMPVVFTFLFLNFPSGLVVYWLCNNVLSIAQQ 527
              MP V  F+   F +GL +YW+ +N+L+IAQQ
Sbjct: 519 FAIMPWVLMFVMAPFAAGLQLYWITSNLLTIAQQ 552