Pairwise Alignments
Query, 524 a.a., branched chain amino acid ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Subject, 500 a.a., ribose import ATP-binding protein RbsA from Vibrio cholerae E7946 ATCC 55056
Score = 287 bits (735), Expect = 6e-82
Identities = 166/486 (34%), Positives = 274/486 (56%), Gaps = 16/486 (3%)
Query: 34 VVRLEGIGKSFGPVRANHDITLDIVPGRIKALLGENGAGKSTLMSILSGRLAQDTGIIHV 93
++ L I K+F V+A +L++ PGR+ AL+GENGAGKSTLM +L+G ++D G I
Sbjct: 5 ILALSQIEKAFPGVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEY 64
Query: 94 DGEAVRFRSPKDALKAGIGMVYQHFMLVDSMTVAENVLLGQSGAWLSPV------HMSRV 147
G+ V F+ P+D+ AGI +++Q L+ +T+AEN+ LG+ SP M R
Sbjct: 65 QGQPVSFKGPRDSQLAGISIIHQELNLIPQLTIAENIFLGRE--MTSPFGRILWDEMHRK 122
Query: 148 VAELAARYGLDIDPAARVCDLSMGERQRVEILKLLYRDSRVLILDEPTAVLTPGETEQLF 207
+L AR + + +LS+GE+Q VEI K L +S+V+I+DEPT LT ETE LF
Sbjct: 123 ADQLLARLNVKHSAKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLF 182
Query: 208 EALHRMAENGKAIVFISHKMQEVLALADEIAILRRGEVVDEFHESEVPGEAELANRMVGR 267
++ + E G IV+ISH+++E+ + D+I +LR G+ + E + E L MVGR
Sbjct: 183 NVINELREQGCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDT-NEDGLIEMMVGR 241
Query: 268 EVILEVAAEPLEPGDRVLHVDGLAGDGLKGLSFEVRKGEVFAIAGVAGNGQRELVECVTG 327
++ + + GD L V GL G G+ +SF ++KGE+ ++G+ G G+ EL++ + G
Sbjct: 242 KLEEQYPRIAAQQGDISLEVIGLTGSGVHDVSFTLKKGEILGVSGLMGAGRTELMKVIYG 301
Query: 328 LRRPAEGEVELLGIPWRQFFTKAPRQG---GLAYIPEDRQGLATCLSLDLVDNFLLTARG 384
G + L G R +P+ G G+AYI EDR+G L L + +N L A
Sbjct: 302 ALPSERGVINLNG---RTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALD 358
Query: 385 CFTRGPFLDRKSADAAARDILAEYNVQPGRAEAPARSLSGGNLQKLVVGREFYRKPSLIV 444
++G + A D + +N++ E +LSGGN QK+ + + KP +++
Sbjct: 359 QLSKGVQIRHADEVIAVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLI 418
Query: 445 AENPTQGLDIAATEEVWARLLEVRSHA-GVLLVSGDLNEVLALADRVAVMYRGCFIGLLD 503
+ PT+G+D+ A +E++ + + ++ ++LVS ++ EVL ++DR+ VM+ G G
Sbjct: 419 LDEPTRGVDVGAKKEIYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFM 478
Query: 504 RSDTNK 509
S+ ++
Sbjct: 479 ASEADQ 484
Score = 101 bits (252), Expect = 6e-26
Identities = 72/236 (30%), Positives = 121/236 (51%), Gaps = 12/236 (5%)
Query: 35 VRLEGIGKSFGPVRANHDITLDIVPGRIKALLGENGAGKSTLMSILSGRLAQDTGIIHVD 94
+ LE IG + V HD++ + G I + G GAG++ LM ++ G L + G+I+++
Sbjct: 257 ISLEVIGLTGSGV---HDVSFTLKKGEILGVSGLMGAGRTELMKVIYGALPSERGVINLN 313
Query: 95 GEAVRFRSPKDALKAGIGMVYQHFM---LVDSMTVAENV---LLGQSGAWLSPVHMSRVV 148
G V SP+D L GI + + LV ++V EN+ L Q + H V+
Sbjct: 314 GRTVNPVSPQDGLANGIAYISEDRKGDGLVLGLSVKENMSLCALDQLSKGVQIRHADEVI 373
Query: 149 AELAARYGLDIDPAAR---VCDLSMGERQRVEILKLLYRDSRVLILDEPTAVLTPGETEQ 205
A +I +R + +LS G +Q+V I K L +VLILDEPT + G ++
Sbjct: 374 AVDDFIRLFNIKTPSREQIIGNLSGGNQQKVAIAKGLMTKPKVLILDEPTRGVDVGAKKE 433
Query: 206 LFEALHRMAENGKAIVFISHKMQEVLALADEIAILRRGEVVDEFHESEVPGEAELA 261
+++ +++ G +I+ +S +M EVL ++D I ++ G + EF SE E +A
Sbjct: 434 IYQLINQFKAEGMSIILVSSEMPEVLGMSDRILVMHEGRISGEFMASEADQEKLMA 489
Score = 68.2 bits (165), Expect = 7e-16
Identities = 67/234 (28%), Positives = 100/234 (42%), Gaps = 10/234 (4%)
Query: 294 GLKGL---SFEVRKGEVFAIAGVAGNGQRELVECVTGLRRPAEGEVELLGIPWRQFFTKA 350
G+K L S V G V A+ G G G+ L++ +TG+ G +E G P K
Sbjct: 17 GVKALDKASLNVYPGRVMALMGENGAGKSTLMKVLTGIYSKDAGSIEYQGQP---VSFKG 73
Query: 351 PRQGGLAYIPEDRQGLATCLSLDLVDNFLLTARGCFTRGPFLDRKSADAAARDILAEYNV 410
PR LA I Q L L + +N L G L A +LA NV
Sbjct: 74 PRDSQLAGISIIHQELNLIPQLTIAENIFLGREMTSPFGRIL-WDEMHRKADQLLARLNV 132
Query: 411 QPGRAEAPARSLSGGNLQKLVVGREFYRKPSLIVAENPTQGLDIAATEEVWARLLEVRSH 470
+ A+ LS G Q + + + + +I+ + PT L TE ++ + E+R
Sbjct: 133 KHS-AKTLLGELSLGEQQMVEIAKALSFESKVIIMDEPTDALTDTETESLFNVINELREQ 191
Query: 471 A-GVLLVSGDLNEVLALADRVAVMYRGCFIGLLDRSDTNKVDAIGLMMAGVSCE 523
G++ +S L E+ + D + V+ G FIG DTN+ D + MM G E
Sbjct: 192 GCGIVYISHRLKEIFEICDDITVLRDGKFIGECRVCDTNE-DGLIEMMVGRKLE 244