Pairwise Alignments

Query, 273 a.a., component of nickel ABC transport system (Dmitry Rodionov) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 783 a.a., Fused ATP-binding protein and permease of ABC transporter from Bifidobacterium breve UCC2003

 Score =  127 bits (319), Expect = 8e-34
 Identities = 79/215 (36%), Positives = 117/215 (54%), Gaps = 12/215 (5%)

Query: 1   MTDTTGNPLLS----LDDIHFTYPGTTAPVLRGATLHLAQGDRLGLLGHNGSGKTTLLHI 56
           MT++  NP  +    L +I F+Y    +  L G +L +  G+R+ L+G NGSGK+T   +
Sbjct: 1   MTESAHNPAYAHAAELKNIRFSYDRGNSWALDGVSLTVRAGERICLVGPNGSGKSTFARL 60

Query: 57  AMGLLRPESGTV----HHRNAVAHDEAS-LAALRRDIGFLFQNADDQLFCPTVLEDVAFG 111
             GL  P+ G +    H   A A   A    A RR IG +FQN +DQL    + +DVAFG
Sbjct: 61  IAGLAAPDGGDITLLGHRAYADALPNADEYRAARRGIGVVFQNPEDQLVTTVLEDDVAFG 120

Query: 112 PLNLGLSPEQARERATQTLQGLGLEGFGARVTHRLSGGEKKMVALASVLSMQPTALLLDE 171
           P NLG+   +  ER   +L+ +GL  F      R+SGG+++  A+A +L+M P  L+LDE
Sbjct: 121 PENLGIERSRIGERIDDSLKSVGLVSFRQSDPTRMSGGQQQRAAIAGMLAMSPAMLVLDE 180

Query: 172 PTNDLDPATR---QRLIDVLNRMSATHIIISHDWD 203
           PT  LD + R    R++D L     T + ++H  D
Sbjct: 181 PTAMLDESARAEVMRILDDLQAQGTTIVHVTHHQD 215



 Score =  119 bits (298), Expect = 2e-31
 Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 15/214 (7%)

Query: 3   DTTGNPLLSLDDIHFTYPGTTAPVLRGATLHLAQGDRLGLLGHNGSGKTTLLHIAMGLLR 62
           D   +P++ +  + + Y       +   +  +A+G  + L+G NGSGK+TL+ +   L  
Sbjct: 271 DDATDPIIRVSHVTYRYSSAKHATINDLSFTIARGQTVALMGANGSGKSTLIRLLCALAT 330

Query: 63  PESGTVHHRN------------AVAHDEASLAALRRDIGFLFQNADDQLFCPTVLEDVAF 110
           P SG++   N            + +     L  LRR +G++ Q+ + QLF  TV EDVA+
Sbjct: 331 PRSGSIDIANVPVATSTGTGTRSKSATRQQLVQLRRHVGYVMQHPEHQLFADTVAEDVAY 390

Query: 111 GPLNLGLSPEQARERATQTLQGLGLEGFGARVTHRLSGGEKKMVALASVLSMQPTALLLD 170
           GP N GL+  +  +R  + L+ L +     R    LSGG++++ A+A V++  P  L++D
Sbjct: 391 GPRNQGLAETEVADRVHEALELLHIGHLADRSPFDLSGGQQRLAAIAGVIACNPDVLIMD 450

Query: 171 EPTNDLDPATRQR---LIDVLNRMSATHIIISHD 201
           EPT  LD   + R   L+  L +   T ++I+HD
Sbjct: 451 EPTASLDTQAKVRIHELLRTLKQQGVTVLLITHD 484