Pairwise Alignments

Query, 224 a.a., cytochrome c-type biogenesis protein CcmC (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 228 a.a., cytochrome c assembly protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  345 bits (884), Expect = e-100
 Identities = 162/228 (71%), Positives = 188/228 (82%), Gaps = 4/228 (1%)

Query: 1   MRNNWLAP----LALAAGAGLAVCQYLIYVYAPVESMMGLVQKIFYTHLPLAWWSFVSFF 56
           MR N L+P    + + AG  LA+CQY+I+VYAPVE  MG+VQKIFY H+PLAWWS +SF 
Sbjct: 1   MRTNRLSPAMPLVGIVAGLALALCQYMIFVYAPVEQTMGIVQKIFYFHMPLAWWSLISFL 60

Query: 57  TVFIASIAFLRTRDRRWDSLAGAAAEVGVLCSGLALVTGSIWGRHSWGVWWTWDPRLTTT 116
           TVF+ASIAFLRTRD +WD+L+GAAAEVGVL SGLAL+TGSIWGRHSWGVWWTWDPRLTTT
Sbjct: 61  TVFVASIAFLRTRDWKWDALSGAAAEVGVLFSGLALITGSIWGRHSWGVWWTWDPRLTTT 120

Query: 117 LVMWFVYAGYLVLRSMNLSRDRQATVSAVVGIAAFVDVPLVFLSARLWRSIHPAVFASRD 176
           LVMWFVYAGYLVLR+++L R+R  TVSAVVGI AF+DVPLVFLSARLWRSIHPAVFAS+ 
Sbjct: 121 LVMWFVYAGYLVLRTLDLPRERLGTVSAVVGIVAFLDVPLVFLSARLWRSIHPAVFASKG 180

Query: 177 GGLEPEMKLTAVVCVAVFGLMWAALTGVRYMQTRQTDRLDTLATREAL 224
           GGLEPEMK T + C+  FG +W ALT +R  Q R   R+D LAT   +
Sbjct: 181 GGLEPEMKTTVIACIVAFGFLWVALTWLRAAQRRMAARIDVLATETTI 228