Pairwise Alignments

Query, 294 a.a., membrane protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 250 a.a., SNARE associated Golgi protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 69.7 bits (169), Expect = 6e-17
 Identities = 56/219 (25%), Positives = 102/219 (46%), Gaps = 15/219 (6%)

Query: 81  VALAGFWFAGGSDLLTLERLRASHDTLVSIY-----RESPVASVLVFSLVYVAATALSFP 135
           V    F F G +  + L RL   HD L + +     R+  V+ + ++  V    TA+  P
Sbjct: 12  VLKGAFVFLGLAAAIALLRLSGLHDALDTAWVDANIRDHGVSGLALYLGVSCLLTAVGMP 71

Query: 136 GAAVLTLGGASVFGFWVSLVAVSFASTVGATLAFMGARYVFRDWVARRFMEPMRRVDEGV 195
              V  LGG + FG  +  V  + A+ +G  + F  AR   + +VARRF   + +++  +
Sbjct: 72  RQVVSFLGGYA-FGAVLGTVWGTLATAMGCVVTFYYARLAGQSFVARRFSRRVAKINAFL 130

Query: 196 RKDGLFYLFSLRLVPVVPFFLVNLLMGLTRMPTRTYYWVSQVGMLPGTAVYVYAGQELGR 255
            +D +   F +R +PV    L NLL G++ +P   ++  S  G +P T ++   G     
Sbjct: 131 GRDPVAMSFIIRCLPVGNNVLTNLLAGVSAIPALPFFVGSAAGYVPQTFIFALLG---SG 187

Query: 256 IRTTADIFSPGLVAAFVLLAVFPWMTRSALAWYRARRMD 294
           +R + ++ +      FV+ ++  ++       YR  R+D
Sbjct: 188 VRVSPELRTTASAVLFVVSSLLGYLL------YRRYRVD 220