Pairwise Alignments

Query, 541 a.a., ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 375 a.a., pseudouridine synthase, RluA family from Dechlorosoma suillum PS

 Score =  196 bits (498), Expect = 1e-54
 Identities = 124/302 (41%), Positives = 171/302 (56%), Gaps = 19/302 (6%)

Query: 19  VPAGMRNERLDRFLGEALSHTDLSREKIKRAIRDGQCTVDGTVCTTPSTRLRSGQRVELA 78
           VP      RLD+ L E L     SR +++  IR+G+ +++G     P  +L  G+ + L 
Sbjct: 28  VPLDAGGRRLDQVLAELLPQ--YSRNRLQTWIREGRVSLNGQPVQEPKHKLLGGEFLNLE 85

Query: 79  -IAPAATAVE-PEEGDLTIIHRDEHLLVIDKPAGLTVHPCPSCPEGTLVHRLVHHFDALR 136
            +     A E PE+    +++ DE +L+I+KPAGL VHP      GTL++ L+HH   L 
Sbjct: 86  EVQDEKLAAETPEDIPFPVVYEDEAILIINKPAGLVVHPGSGNWSGTLLNALLHHTPQLA 145

Query: 137 AQEGFRPGIVHRIDKDTSGLLLVALSEGVRLKLSEAFAERTVEKEYLALVHGVPPATGEV 196
                R GIVHR+DKDTSGL++VA +   +  L      RTV++EY AL+ G     G V
Sbjct: 146 QVP--RAGIVHRLDKDTSGLMVVAKTLEAQTDLVRQLQARTVKREYRALLVGYLNRNGTV 203

Query: 197 DAPIGRHPTHKVRMAVVK-GGKPARSEWRVLHAAPEGHY---ALVAVRIHSGRTHQIRVH 252
           DAPIGRHPT + +MAVV+  G+ AR+ + VL      H+    LV  R+ +GRTHQIRVH
Sbjct: 204 DAPIGRHPTQRTKMAVVQHNGREARTHYTVLE-----HFERCTLVQCRLETGRTHQIRVH 258

Query: 253 MAHAGFPLWGDQLYGPGTPARLREQGYGARQMLHAWHLAFTHPVTGERLRFTCPPPQDFP 312
           MA  GFPL GD +Y  G  A +R      RQ LHA+ L   HP+T E +++  P P D  
Sbjct: 259 MAALGFPLVGDAVYNKGKTAGVR----FPRQALHAYRLGLIHPLTREPMQWDAPVPDDMA 314

Query: 313 DL 314
            L
Sbjct: 315 AL 316