Pairwise Alignments

Query, 541 a.a., ribosomal large subunit pseudouridine synthase D/dephospho-CoA kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 370 a.a., RluA family pseudouridine synthase from Ralstonia sp. UNC404CL21Col

 Score =  189 bits (480), Expect = 2e-52
 Identities = 124/312 (39%), Positives = 170/312 (54%), Gaps = 17/312 (5%)

Query: 19  VPAGMRNERLDRFLGEALSHTDLSREKIKRAIRDGQCTVDGTVCTTPSTRLRSGQRVELA 78
           +P  M  ERLD+ L + L   D SR ++++ I  G   + G V   P   +  G R+E+ 
Sbjct: 55  IPEAMHGERLDKALAKLLP--DYSRSRLQQWIDAGAVRLRGEV-VRPRAAISGGDRIEVV 111

Query: 79  IAPAA--TAVEPEEGDLTIIHRDEHLLVIDKPAGLTVHPCPSCPEGTLVHRLVHHFDALR 136
              AA   A   E  DL +++ D+ LLVI+KPAGL VHP      GT+++ L+H +    
Sbjct: 112 PQRAADENAFVAEPIDLDVVYEDDTLLVINKPAGLVVHPAAGNWSGTVLNGLLHRYPD-- 169

Query: 137 AQEGFRPGIVHRIDKDTSGLLLVALSEGVRLKLSEAFAERTVEKEYLALVHGVPPATGEV 196
           A E  R GIVHR+DKDTSGL++VA +   +  L      RTV++ YLALV G  P    +
Sbjct: 170 AVELPRAGIVHRLDKDTSGLMVVARTLPAQTDLVRQLQARTVKRTYLALVWGETPEEATI 229

Query: 197 DAPIGRHPTHKVRMAVVK--GGKPARSEWRVLHAAPEG--HYALVAVRIHSGRTHQIRVH 252
           DAPIGR P  + RMA+++   GKPAR+ ++ L     G    +LV  ++ +GRTHQIRVH
Sbjct: 230 DAPIGRDPRDRTRMAIIETASGKPARTHFKTLDVVDLGRAQVSLVRCQLETGRTHQIRVH 289

Query: 253 MAHAGFPLWGDQLY----GPGTPARLRE--QGYGARQMLHAWHLAFTHPVTGERLRFTCP 306
               G PL GD +Y      G P  ++       ARQ LHA  L   HP TG+ + +   
Sbjct: 290 FESEGHPLLGDPVYTRNFRRGQPQTIKAPLPVPFARQALHAVRLGLVHPATGKSVHWEAG 349

Query: 307 PPQDFPDLAIAL 318
            P DF DL  AL
Sbjct: 350 VPDDFADLLEAL 361