Pairwise Alignments

Query, 456 a.a., type I secretion outer membrane protein, TolC family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 449 a.a., peptidase from Pseudomonas fluorescens FW300-N2C3

 Score = 77.4 bits (189), Expect = 9e-19
 Identities = 82/381 (21%), Positives = 160/381 (41%), Gaps = 28/381 (7%)

Query: 57  ENREAATHDLRRARAGWLPRVDVRAGYGAEQ----YSDTTSRQSNKDDEFTERGDASAVL 112
           + R+A   +    RAG LP +      G  Q    Y +      + D  ++  G +S  L
Sbjct: 42  KERDAGLENRAIGRAGLLPHLGYSYNKGRNQSKVTYLNDRGASQHDDRNYSSYG-SSLTL 100

Query: 113 TQTVWDGFATSSRVDVGKAKLDSADNRLMDNAEALGLDAVLAHIEVLRQREIVRLSEINV 172
            Q + D +   +    G A+   AD    D ++AL +  +  + + L  ++ + +++   
Sbjct: 101 QQPLLD-YEAYAAYRKGVAQALFADESFRDKSQALLVRVLSQYTQALFAQDQIDIAQAKK 159

Query: 173 QQHQTILGSQSERQKMGVASIADVTQTQGRLARAQSTLVESRSALEVAEAAYKRLTGMEV 232
           +  +       +  + G  +  D+ + Q R   A +  +E+R   + A      L G+  
Sbjct: 160 KAFEQQFQQNEQLFRQGEGTRTDILEAQARYELAIAEEIEARDEQDAALRELGSLIGVPA 219

Query: 233 PTELERAGIPDT------APASFETALGASLTANPKIAAYQSDIQAARGQEDLDKSRFHP 286
               + A + DT       PASF+T    +++ NP +A+ +  +  AR + + +++   P
Sbjct: 220 LDIGDLAPLHDTFQTFALQPASFDTWHELAVSNNPSLASQRQAVDVARFEVERNRAGHLP 279

Query: 287 NVYL---------EVGPSYKERVESSESYAWGTTAMMRVNWNIYDGGADVAAVRGSAARV 337
            V           E G +Y +R +++       T  + V+  +Y GG   A+ R ++  +
Sbjct: 280 KVSAYATMRQNESESGNTYNQRYDTN-------TIGLEVSVPLYAGGGVSASTRQASRNM 332

Query: 338 RQSRQELQNLLDTLNEETRATWSRYLSAHEQSSFYTTAVTYNTQTRDTYMQQFLVGQRSL 397
            Q+  EL+        E R  +S  +S   +   Y  A++       +  Q  L G+R  
Sbjct: 333 EQAEYELEAKTRETLIELRRQFSACVSGMNKLRAYQKALSSAEALVVSTRQSILGGERVN 392

Query: 398 LDVLDAENELYSSEVQLVTAK 418
           LD L+AE +LY++   L  A+
Sbjct: 393 LDALNAEQQLYTTRRDLAQAR 413



 Score = 29.3 bits (64), Expect = 3e-04
 Identities = 28/148 (18%), Positives = 62/148 (41%), Gaps = 19/148 (12%)

Query: 46  INSNPKLKVFQENREAATHDLRRARAGWLPRVDVRAGYGAEQYSDTTSRQSNKDDEFTER 105
           +++NP L   ++  + A  ++ R RAG LP+V          Y+     +S   + + +R
Sbjct: 250 VSNNPSLASQRQAVDVARFEVERNRAGHLPKVSA--------YATMRQNESESGNTYNQR 301

Query: 106 GDASAV---LTQTVWDGFATSSRVDVGKAKLDSADNRLMDNAEALGLD------AVLAHI 156
            D + +   ++  ++ G   S+        ++ A+  L        ++      A ++ +
Sbjct: 302 YDTNTIGLEVSVPLYAGGGVSASTRQASRNMEQAEYELEAKTRETLIELRRQFSACVSGM 361

Query: 157 EVLR--QREIVRLSEINVQQHQTILGSQ 182
             LR  Q+ +     + V   Q+ILG +
Sbjct: 362 NKLRAYQKALSSAEALVVSTRQSILGGE 389